Salvelinus namaycush (lake trout): 120055012
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Entry
120055012 CDS
T07522
Symbol
cdh2
Name
(RefSeq) cadherin-2
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120055012 (cdh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120055012 (cdh2)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120055012 (cdh2)
04090 CD molecules [BR:
snh04090
]
120055012 (cdh2)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
120055012 (cdh2)
Cell adhesion molecules [BR:
snh04515
]
Cadherins
Major cadherins
120055012 (cdh2)
CD molecules [BR:
snh04090
]
Proteins
120055012 (cdh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
DUF2304
DUF3149
DUF2254
Cytomega_TRL10
Stevor
Motif
Other DBs
NCBI-GeneID:
120055012
NCBI-ProteinID:
XP_038858771
UniProt:
A0A8U1BK72
LinkDB
All DBs
Position
Sna10:38844266..38922293
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AA seq
920 aa
AA seq
DB search
MFLTAGALLMLLAAVQVAVHGGRAVGLLPRRQRSLPCTQGFSQEEYSIAVDEELREGQAL
LTVRFADCGLGDRVLLEVGDAVDFRLGEDGMVYARHALRLADRRRAFLVVRARDQKTKEE
WNTRVHLHLRTDGQGETTEHNKQVNSSDAAVIMFPWRSVVVRGGRHGSLRRVKRDWVIPP
INVPENSRGQFPEELVRIRSDRDKNRLLRYSVTGPGADQPPTGIFIINPISGQLSVTKPL
DREHISNFHLRAHAVDLNGNQIENPIDIVINVIDMNDNRPEFTHTIYNGSVPEGSKPGSF
VMTVTSVDKDDPKTANGMLRYKIISQNPESPSSNMFTINNKTGGIITVAAGLDREKVPQY
TLIIQATDMEGNPTYGLSNTATAIIRITDVNDNPPEFTADTFYGDVHENRVNVIVANLTV
TDKDQPHTAAWRTVYRITAGDPTGRFSIPTDPTTNEGLVTVVKPIDYEGSRSFVLTVLAE
NEVALARGIHLPRQSTATVSVRIVDVNESPEFSPNPKAIKLEEGLPAGSLLTTFTAQDPD
RYMQQNIRYSKLFDPANWLEIDPVNGRISTIAVLDRESPYVKNNLYNITFMASDNGIPPA
SGTGTLQMYLLDINDNAPHVFPPEVEMCEKPEPNAINITASDPDLTPNAGPFAFELANRP
ADARRNWTLTRLNGEYAQIRLRIGFLESGIYEVPIIITDSGNLPMSNTSYLRVKVCQCDH
HGDCVDMERIIAAGLGTGAIIAILICIIIMLVMVLFFVMWMKRRDKERQAKQLLIDPEDD
VRDNILKYDEEGGGEEDQDYDLSQLQQPDALEPEMVKVGIRRMDERPLHQDHLYPLRSAA
PHPGDIGDFIHEGLKAADNDPTAPPYDSLLVFDYEGSGSTAGSLSSLHSSSSGGDQDYDY
LSDWGPRFRKLADLYGGGDD
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgtttcttactgcgggcgctctattgatgctactggcagctgtgcaggttgctgtgcat
ggcgggcgggccgtggggttgttgccacggaggcagaggtcgttgccgtgcacacaaggg
ttctcccaggaggagtacagtattgccgtggacgaggagctgagagagggacaagcactc
ctcaccgtgaggtttgcagattgtggcctgggcgacagggttctgttggaggtgggcgac
gcggtggacttcaggctgggtgaagatggcatggtgtacgcccggcacgccctccgtctg
gcggacaggaggagagccttcctggtggtgcgagcgagggatcagaaaaccaaggaggag
tggaacacacgcgttcacctccacctccggacagatggacagggagagacaacagaacac
aacaaacaggtgaactccagtgatgcagctgtgatcatgtttccatggcgtagcgtggtc
gtcaggggtggtcgtcatggatctctgaggcgggtaaagagggactgggtcatccccccc
atcaacgtccctgagaactcacgaggacagttcccagaggaactagtcaggatccggtcg
gaccgtgataagaaccgtctcctccggtacagtgtgactggacccggtgctgatcagcct
ccgaccgggatcttcatcatcaaccctatctctggtcagctctctgtgaccaaacccctc
gaccgcgaacacatctccaacttccatctgcgagcccatgctgtggacctgaatgggaac
cagatagagaaccccatagacattgtcatcaatgtcatagacatgaacgacaacagacca
gagttcacacacaccatctacaacggatcagtaccagaaggctccaaaccagggtccttt
gtgatgacagtgacatcagtggacaaggacgaccctaagacagccaatgggatgctccga
tacaagattatatctcagaaccctgagagtccttcttccaacatgttcaccatcaacaac
aagacaggaggcatcatcactgtagcagcaggcctcgacagagagaaagttcctcagtac
acactgataatccaggctactgacatggaggggaaccccacctacggcctgtctaacaca
gctacagctatcatcaggatcactgacgtcaatgataaccccccagagttcaccgctgac
acattttatggagatgtgcatgagaaccgtgtgaatgtgatcgtagctaacctgacagtg
acagataaggaccagccccatactgcagcctggaggactgtgtacaggatcaccgctgga
gaccccactggacgcttctccatccccactgaccccaccaccaacgagggactggtcact
gtggtcaagcccatagactatgaggggagtcgttcctttgtgttgacggtgctggctgag
aatgaggttgccctggcccgtggtatccaccttccccgtcagtccaccgctaccgtgtct
gtacgcattgtagatgtcaacgagagcccagagttctcccccaaccctaaagccatcaaa
ctggaggaggggctaccagccggctcgctactcaccaccttcacagcacaggaccctgac
agatacatgcagcagaacatacggtattcaaagctgtttgaccctgctaattggttggag
atagaccctgtaaatgggcggatctccaccatcgctgtgctggacagagagtctccctat
gtgaagaataacctctacaacatcaccttcatggcctctgacaatggcattccccctgcc
agtggtacgggtacgttacagatgtaccttttagacataaacgacaatgctcctcatgtc
ttccctccggaagtggagatgtgtgagaagcctgagcccaacgccatcaacatcaccgcc
agcgaccccgatctgacccctaacgccggcccctttgccttcgaactggccaaccggcca
gcagacgcacgacgaaactggaccctcacacgcctcaatggtgaatatgctcagatcagg
ctgcggataggttttctggagagtggtatctacgaggttccaatcatcatcacagactca
ggcaacctgcccatgtccaatacatcctacctgagggtcaaggtgtgtcagtgtgatcac
catggagattgtgtggacatggaacgcatcatcgcagcaggcctgggcactggagccatc
atcgccatcctcatctgtatcatcataatgctagtgatggtgttgttctttgtgatgtgg
atgaagaggagggataaggaacgtcaggccaagcagctgctgatcgacccggaggacgat
gtcagagacaacatactgaagtacgacgaagagggaggaggagaggaggaccaggactat
gacctgagccagctgcagcagcccgatgctttggagccagagatggtaaaggtgggaatc
aggcgtatggacgagagacccctccaccaggaccacctgtaccccctccgctctgctgca
ccccacccaggagatataggagacttcatccatgagggtctgaaggcagctgataacgac
ccgacggcgcccccctacgacagcctgctggtttttgactatgagggcagcggctccacc
gccggctccctcagctcccttcactcgtcttcctccggcggagaccaggactacgactac
ctcagtgactggggcccgcgcttccgcaagctggcagacctctacggaggaggggacgac
tag
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