Salvelinus namaycush (lake trout): 120055050
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Entry
120055050 CDS
T07522
Symbol
si:ch73-61d6.3
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03272
Virion - Hepatitis viruses
snh04382
Cornified envelope formation
snh04514
Cell adhesion molecule (CAM) interaction
snh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
120055050 (si:ch73-61d6.3)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120055050 (si:ch73-61d6.3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120055050 (si:ch73-61d6.3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120055050 (si:ch73-61d6.3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120055050 (si:ch73-61d6.3)
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120055050 (si:ch73-61d6.3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
DASH_Dad1
PRP1_N
DUF349
MbeD_MobD
DASH_Dad2
Motif
Other DBs
NCBI-GeneID:
120055050
NCBI-ProteinID:
XP_038858841
UniProt:
A0A8U1EU44
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All DBs
Position
10:43479956..43521585
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AA seq
546 aa
AA seq
DB search
MFEKQRYDSPPVYSPPYSPESNGYGPPQSYHPPRSEFDPYPPPPGSYYMEEKPQHFYKWI
SPPGIVKAMFGTIIVLCVGIFACVASTLVWDMQYGMGGMGGMGSYGGGMGYGGGYGGMGG
GYGSSYGSGYGGGYGGGYGSSYPTPYSAKTTMIAMAAINFFVALGFFVASFSKSTTFRSR
KFFLVVLVVSAIMAVIQGIITVVYVVGVNPMAQSSQNMIYNPMLMMCQNLYGSSYSNMGG
VGGFGMYNQYLYHYCYVDPQEGVAMVCGFLVTAALVVAAFFSHKTRGKIWRYGKPNIYWE
QPPETGGLVSEGRDVKDWVNNVEDEQSTQGAPTVVLSEKSVPLNASANSIISYPTKADSR
VYTGDTYNDDVYSEHLASRPSDQPSQGASSSPSEEAGGVRKPSANRGKRRRRNPELDESQ
YETEYTTGGETGNELDPEEWESVYPEITSDSQRQEYKREFDADLREYKHLCAEMDDISDQ
MNKLSRQLDTLDETSAQYQVVAEEYNRLKDVKRTPDYQAKKLECRKLRHKLFHVKRVVKA
YDKSLS
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaagcagcgttacgacagccctcccgtctacagtcctccatacagcccggaa
tccaatggctacggccccccacaaagctaccacccgcccaggagtgagtttgacccatat
ccacccccaccgggctcctactacatggaagagaagccccaacacttctacaagtggatc
tctcctcctggcatcgtcaaggccatgtttggcacaatcatagtgctctgtgtggggatc
tttgcctgtgtggcctccacccttgtctgggacatgcagtacgggatgggggggatgggg
gggatgggctcctacggcggagggatgggctacggtggcggttatgggggaatgggcggc
ggctatggctccagctacggctctggctatggaggaggctatggaggaggctatggtagc
tcctacccgacaccttactcggccaaaacaaccatgatagctatggcggccatcaacttc
tttgtagcgctgggattcttcgtggccagtttctctaaatcgaccacgttcaggagcagg
aagttcttcctggtggttctggtggtcagtgcgatcatggctgtcatccagggcatcatc
accgttgtgtacgtcgtaggggtgaaccctatggcacagagctctcagaacatgatctac
aaccctatgctgatgatgtgccagaacctgtatggaagcagctattctaatatgggtgga
gtggggggtttcggcatgtataaccagtacctctatcactactgctacgtggacccacaa
gagggtgtagccatggtgtgtggcttcctggttaccgctgccttggtcgtggctgctttc
ttctcccacaaaaccagaggcaagatctggcgctacggcaagcccaacatctactgggaa
cagccccctgagactggaggactagtttctgaaggcagagatgtgaaggactgggtgaac
aatgtagaggacgaacaaagtacccagggtgcacctaccgtggtgctgtcagagaagtcc
gtccccctcaacgcctcagccaatagcatcatctcctacccgaccaaggctgacagcagg
gtgtacactggagacacctacaatgatgacgtgtattcggagcatctggctagccgtccc
tcggaccagccctcccagggggccagttccagcccctctgaggaggcagggggggtccgg
aagccctctgccaacagggggaagaggcgccggcgcaaccctgagctggatgaatcacag
tacgaaacagagtacaccacgggaggagagactggcaacgaactggacccagaggagtgg
gagagcgtctacccagagataacgtcagacagccagcggcaggagtacaagagggagttt
gatgccgacctgagggagtacaaacacttgtgtgctgagatggatgacatcagtgaccag
atgaacaaactcagcaggcagctggacacactggacgagacctccgcccagtaccaggtt
gtggcagaggaatataatcgactgaaagacgttaagaggacaccagactaccaggctaag
aagctggagtgtcgcaagttgagacacaaactgttccatgtgaaacgtgtggtcaaggcc
tacgacaagagtctttcttaa
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