Salvelinus namaycush (lake trout): 120055087
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Entry
120055087 CDS
T07522
Symbol
atf6
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-6 alpha
KO
K09054
cyclic AMP-dependent transcription factor ATF-6 alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120055087 (atf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120055087 (atf6)
Transcription factors [BR:
snh03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
CREB
120055087 (atf6)
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GFIT
Motif
Pfam:
bZIP_1
bZIP_2
ZapB
Motif
Other DBs
NCBI-GeneID:
120055087
NCBI-ProteinID:
XP_038858911
UniProt:
A0A8U1BQX0
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Position
Sna10:complement(45206946..45322481)
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AA seq
627 aa
AA seq
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MSSELMLDFETQEQEMMNSETGTMSIDQDGEWDISLFDELDNLGDADELLQALECVGYAG
DAPDLDFDMDLPPWSTDTDGDLSVDSLSPAHTMSSVTLPASREALSPYSIQDDLALSPQP
SPAVSVCSESSGFSEPPLAKRAPKRTSQATRVKPAQAVKRPIQLTPKVSIQPRPVVTAVP
QHAAGPLQTIIIQPLQTTLVPHPAVVKPAPVSIQPAPPIGGPLVLCQPAQVLQIHTPQAV
TGHLVTMPTLTQERPAPIAVTLHSPGSDEDSKVSQRQQRMIKNRESAFQSRKKKKEYLLT
LEVRLKMALSENQLLKDENGTLKRQLEGLLSENTVLKTSAPKRRAICLMVVLVFLMLNVG
PMSLFEGGRGSKLQAGSMHSGRHLLDFSQETETPVGPESLQTTPPTHSSEDKALMVVKKD
PLFFGPPPPCLPPVNRTKCLRLNHELRGWVHRHEVERTKTRRMSNSQHRANRTIPKEDKK
DEVSQVLTVQYTDSTEKSPGNELQVYYAPHRTYNDFFDEIHRRGDTFYVVSFRRDHLLLP
ATSHNKGSRPKMSVVLPAMNLNDRVIKDKEFEVMMQIDCEVTDTRIIHIKSSSIPPFLRV
NRTGTLYPPSPADSEATPPVQVLMGSA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgagttaatgttagacttcgagactcaagaacaagaaatgatgaacagtgaa
actggcaccatgtccatcgaccaggatggcgagtgggacatcagcctgtttgacgagctg
gacaaccttggagatgcagacgaacttcttcaggccttggagtgcgtgggatatgccggc
gatgcccctgacctcgactttgacatggacctgcctccctggagcactgacacagatggg
gatctgagtgtggactctctctctcctgcccataccatgagctctgtcaccttgcctgca
tcccgagaggccctgtcaccttactccatacaagatgatctagccctatctcctcagccc
tctcctgccgtctctgtctgctccgagtccagcggcttctcagagccccccctggccaag
agggcccccaagaggaccagtcaggccacgcgagtcaagccagcccaggcagtgaagagg
cctatccagctcacccccaaggtgtccatccagcccagaccagttgtaacagctgtaccc
cagcacgccgcaggccctctccagaccatcatcatccagcccctgcagaccaccctggtg
cctcaccctgctgtggtcaaacctgcccctgtcagcatacagccagcgccacctataggt
ggtccgttggtgctgtgccagccggcccaggtgctgcagatccacacgccacaggcagtc
accgggcacctggttaccatgccaacactgacccaagagaggcccgcccccattgcagtc
acactccacagccctggctctgacgaagattcgaaggtgtcccagcggcagcagaggatg
ataaagaacagggagtcagcgtttcagtcccgtaagaagaagaaggagtacctgctgacg
ctggaggtccgtctcaagatggcgctgtctgagaaccagctgctcaaggacgagaacggc
accctgaagagacagctggagggactactgtcagagaacacggttctgaagaccagtgct
cctaagaggcgggccatttgtctcatggttgtgctggtgttcctcatgctcaatgttgga
ccaatgagtttgtttgaaggtggccgtggctctaaactccaggctggctctatgcacagc
ggcagacatctgctggacttctcccaagagacagagaccccggtgggccccgaatccctc
cagaccacccctccgacccacagttcggaggataaggctctgatggtggtgaagaaggat
cctctgttcttcggacctcctcctccctgtctgccgcctgtcaacaggaccaaatgcctc
aggttgaaccatgagctgcgaggctgggtccatcgacacgaggtggagcggaccaagacc
agacgcatgagcaacagccaacaccgagccaacaggactatccctaaagaggataagaag
gatgaggtgtcccaggtcctaacagtccagtacactgactccacagagaagagcccaggt
aatgagctgcaggtgtactacgctcctcaccgcacctacaacgacttctttgacgagatt
catcgccgtggagacaccttctacgtggtgtctttccgcagggatcaccttttacttccc
gctaccagccacaacaaaggaagtaggcccaagatgtccgtggtgttgccagccatgaac
cttaatgatcgtgtgatcaaggacaaggagtttgaggtgatgatgcagattgactgtgag
gtcacagacaccaggatcatccacatcaagtcctccagtatcccaccattcctgcgtgtc
aaccgcaccggcaccctgtacccgccttcacctgcggacagcgaggccacgcctcctgtc
caggtgctcatgggttccgcgtaa
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