Salvelinus namaycush (lake trout): 120055090
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Entry
120055090 CDS
T07522
Name
(RefSeq) E-selectin-like isoform X1
KO
K06496
selectin, platelet
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120055090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120055090
04090 CD molecules [BR:
snh04090
]
120055090
00536 Glycosaminoglycan binding proteins [BR:
snh00536
]
120055090
04091 Lectins [BR:
snh04091
]
120055090
Cell adhesion molecules [BR:
snh04515
]
Lectins
Selectins and C-type lectins
120055090
CD molecules [BR:
snh04090
]
Proteins
120055090
Glycosaminoglycan binding proteins [BR:
snh00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
120055090
Lectins [BR:
snh04091
]
C-Type lectins
Selectins
120055090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sushi
Lectin_C
EGF
Motif
Other DBs
NCBI-GeneID:
120055090
NCBI-ProteinID:
XP_038858918
UniProt:
A0A8U1BNU4
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Position
Sna10:complement(45513284..45523005)
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AA seq
807 aa
AA seq
DB search
MDFCSASQQARSPSSWITLFLLYSIVTMCSRVEGWSYHHSNKTMNWDTARKWCTEHYTDM
VAIQNRGEISHLNSILPRQTNYYWIGIRKVDDVWTWVGTNKTLTKEAENWADGEPNNGGN
KEDCVEMYIKREKDTGKWNDETCMKKKTALCFTASCQSDSCYHGECVETINSHRCKCFEG
FYGEQCEHVVECKMEEVTVPAKASVSCSHPNGNFSFDSTCQYSCEEGYRLSSSGPVRCTA
SESWSEQPPTCELVLCSELYEPVKGSMACSHPLGSFSYLSTCTFTCEEGYERLASSSATL
QCGASGQWNDSQPQCVAVSCPTLQQPQDGAISCGEDFTYGSSCNFSCSEGYLLKGAITVT
CTSAAEWSEEIPHCEVVLCSELYEPVKGSMACSHPLGSFSYLSTCTFTCEEGYERLASSS
ATLQCGASGQWNDSQPQCVAVSCPTLQQPQDGAISCGEDTYGSSCNFSCSEGYLLKGAIT
VSCTSAAEWSEEIPHCEVVLCSELYEPGKGSMACSHPLGSFSYLSTCTFTCEEGYERLAS
SSATLQCGASGQWNDSQPQCVAVSCPTLQQPQDGAISCGEDTYGSSCNFSCSEGYLLKGA
ITVSCTSAAEWSEEIPHCEVVLCSELYEPGKGSMACSHPLGSFSYLSTCTFTCEEGYERL
ASSSATLQCGASGQWNDSQPQCVAVSCPTLQQPQDGAISCGEDFTYGSSCNFSCSEGYLL
KGAITVTCTSATEWSEEIPHCEATPEPPLNPTILGLAAGGAVSLSGLSLAAWLLKRIRQK
ANKFDLNSTSDIEEPLQTYRNSIDSLI
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggacttctgctctgcatcacagcaagccagaagccccagctcatggatcaccctcttc
ctcctgtactcaattgtcaccatgtgcagtagagtagagggctggtcctaccatcactcc
aacaaaactatgaactgggacactgctagaaagtggtgcacggagcactacactgacatg
gtggccatccagaaccgtggagagatctcccaccttaacagcatcctgcccaggcagacc
aactattactggatagggatccgtaaggtggacgacgtgtggacatgggtggggaccaat
aagaccctgactaaagaggcagagaactgggcagacggagaacccaacaacggggggaac
aaggaggactgtgtggagatgtacatcaagagagagaaggacacagggaagtggaacgac
gagacgtgtatgaagaagaagacggctctgtgcttcacagcctcgtgtcagagcgactca
tgttaccatggagagtgtgtggagaccatcaacagccaccgctgtaaatgctttgagggc
ttctacggagagcagtgtgaacacgttgttgaatgtaagatggaggaggtcactgtccct
gctaaagccagtgtcagttgctctcaccccaatgggaatttctcctttgactcgacgtgt
cagtattcctgtgaagaggggtaccggctgagcagctccgggcctgtgagatgcacagcc
tcagaatcatggtcagaacagcctcccacctgtgaattggtcttatgcagtgagctgtat
gaacctgtgaagggttccatggcctgctcccatcccctgggctccttcagctacctgtcc
acctgtacctttacctgtgaggagggctatgagaggctggcctccagctctgctaccctg
cagtgtggagcctcgggacagtggaacgactcacagccgcagtgtgttgctgtaagctgc
cctaccctccagcagccacaggatggcgctatcagctgtggagaagacttcacctatgga
agcagctgtaactttagctgctctgagggttatctcctcaagggggcgatcacggtgacc
tgcacatcagctgctgagtggagtgaggagataccacactgtgaagtggtcttatgcagt
gagctgtatgaacctgtgaagggttccatggcctgctcccatcccctgggctccttcagc
tacctgtccacctgtacctttacctgtgaggagggctatgagaggctggcctccagctct
gctaccctgcagtgtggagcctcgggacagtggaacgactcacagccgcagtgtgttgct
gtaagctgccctaccctccagcagccacaggatggcgctatcagctgtggagaagacacc
tatggaagcagctgtaactttagctgctctgagggttatctcctcaagggggcgatcacg
gtgtcctgcacatcagctgctgagtggagtgaggagataccacactgtgaagtggtctta
tgcagtgagctgtatgaacctgggaagggatccatggcctgctcccatcccctgggctcc
ttcagctacctgtccacctgtacctttacctgtgaggagggctatgagaggctggcctcc
agctctgctaccctgcagtgtggagcctcgggacagtggaacgactcacagccgcagtgt
gttgctgtaagctgccctaccctccagcagccacaggatggcgctatcagctgtggagaa
gacacctatggaagcagctgtaactttagctgctctgagggttatctcctcaagggggcg
atcacggtgtcctgcacatcagctgctgagtggagtgaggagataccacactgtgaagtg
gtcttatgcagtgagctgtatgaacctgggaagggatccatggcctgctcccatcccctg
ggctccttcagctacctgtccacctgtacctttacctgtgaggagggctatgagaggctg
gcctccagctctgctaccctgcagtgtggagcctcgggacagtggaacgactcacagccg
cagtgtgttgctgtaagctgccctaccctccagcagccacaggatggcgctatcagctgt
ggagaagacttcacctatggaagcagctgtaactttagctgctctgagggttatctcctc
aagggggcgatcacggtgacctgcacatcagctactgagtggagtgaggagataccacac
tgtgaagccacacctgagcctccattgaaccccactatcctaggcctggcagcagggggc
gctgtgtcattatctggcctgtctctggctgcatggctcctcaaacgaatcagacagaaa
gctaacaagtttgatctgaacagcacctcagacattgaggaacctttacagacctacagg
aacagcatcgacagcctcatatag
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