Salvelinus namaycush (lake trout): 120055100
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Entry
120055100 CDS
T07522
Symbol
farp2
Name
(RefSeq) FERM, ARHGEF and pleckstrin domain-containing protein 2 isoform X1
KO
K06082
FERM, RhoGEF and pleckstrin domain protein 2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120055100 (farp2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FERM_C
FERM_M
FA
FERM_N
SOS1_NGEF_PH
PH_13
IQ_SEC7_PH
RHG20_PH
PH_20
Motif
Other DBs
NCBI-GeneID:
120055100
NCBI-ProteinID:
XP_038858940
UniProt:
A0A8U1BLF1
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Position
Sna10:46307165..46396026
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AA seq
1106 aa
AA seq
DB search
MGEIEGSYRAIQTPGTRLGAQFNAGISTLEPGQSLSDALGPGGRSPGRGLQLRVQSLDDS
QEFYDLESRADGQTLLSDVFRRSNLRESDYFGLEFQNMQMSWVWLEPTKLVVKQVKRPMN
TLFRLSVKFFPPDPGQLQEEYTRYLFSLQMKRDLLEGKLSCTENTASLLASHLLQSEIGD
YDDVADRDFLKLNKLLPNQERIQERIMELHHRHLGQTPADSDFQVLEIARKLEMYGVRFH
PAADREGTKINLAVAHIGLQVFQGNTKINTFNWSKIRKLSFKRKRFLIKLYPEVHGPHQD
TLEFQMVSRDQCKIFWKNCVEHHSFFRLLDQPQPKSKAILFSRGSSFRYSGRTQKQLVEY
VKDSGSRRTPYQRRNSKVRMSARSLAPDVPKQTLSFNDSLRAPGSPSSASGSFYSIQVSS
SPPRPEPQAQSPQPPPQQQQTQFPQLSPQQQQTQLLPPQLARPSSPPAKEDPHKATGIPP
CHHAFSQGAPSYPAAGDCNPSSVCVESRASHPQQQPSQNGNEDSEQGSSMDSPQLSPFNS
KSSPLCLSPSFQMSTLSLPGAGQAPSPLQSPILSEVGTNRLEEEEEGRRKRYPTDKAYFI
AKEILTTERTYLKDLEVITVWFRSAVIKENAMPEGLMALLFSNIDPIYEFHRGFLKEIDQ
RLALWEGRSNAHVKGDFQRIGDVMLRNMCALKVFTSYLQKHDEVLTELEKATKRLKKLET
VYKEFELQKVCYLPLNTFLLKPIQRLMHYKLILERLCKHYSPDHLDHNNCREALKEVAEM
ATQLQSSLIRLENFQKLSELQRDLIGIENLTAPGREFIREGCLYKLTKKGLQQRMFFLFS
DQLLYTSKGVTATNQFKVHGQLPLHGMIVEESENEWSVPHCFTIYSAQRTIVVAASSKVE
MGKWIEDLNMAIEMAKKSQEKSDLFLDPGLCDRSNRSSDEVSLEQESEDDMSSSRNSLDK
QTHHRANSTMHVCWHRNTSVSMSDHSLAVENQLSGYLLRKFKNSNGWQKLWVVFTNFCLF
FYKTHQDDFPLASLPLLGYTVSSPGESDSIHKEYVFKLQFKSHVYFFRAESEYTFERWME
VIKSAASATGRMSLLIPKGPLQMNGN
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaattgagggttcctacagggccatacagacccctggcacccggctgggggcc
cagttcaatgctgggatcagtaccttggagccgggccagagcctcagtgatgccttgggc
cccgggggtaggagcccaggcagaggactacagctcagggtccagagcctggacgactcc
caggagttttacgacttggagtccagagctgacggacagactcttctctctgatgtgttc
cggaggagcaacctaagggagagcgattactttggcctagagttccagaacatgcagatg
agctgggtttggttggaacccacgaagctcgtagtgaaacaagtgaagagacccatgaac
accctcttcaggctgtcagtgaagttctttcctcctgaccctggtcagctgcaggaagag
tacactaggtacctgttctccctgcagatgaagcgagacctgctagagggcaagttgagc
tgtacagagaacacagcctccctgctggcctcacacctccttcagtcggagataggggac
tatgacgacgtggcggacagggacttcctgaagctgaacaagctgctgcccaatcaggag
aggatacaggagaggatcatggaactgcaccacagacacctcgggcagactccagccgac
tcagactttcaggttctggagatcgcccgtaaactggagatgtacggcgtccgcttccac
ccagctgccgaccgcgagggaacgaagatcaacctggccgtggctcacataggcctgcag
gtcttccagggtaacaccaaaataaacaccttcaattggtccaagatccgaaaactgagc
ttcaagaggaaacgcttcctgatcaagctatacccagaggttcatgggcctcatcaggat
accctggagttccagatggtcagtcgggaccagtgtaagatcttctggaagaactgtgtg
gaacatcactcgttcttccgactcttggatcagccgcagcccaagtccaaagccattctc
tttagcaggggatcgtcgttcagatacagtgggaggacccagaagcaactagtggaatat
gtcaaggacagcggatcaaggaggacaccatatcagaggaggaacagtaaggtgaggatg
tcagctcgctctctggcccccgatgtgccaaaacagacgttgtcgttcaatgacagcctg
cgggcgccaggttccccgtcctctgcgtctgggtccttctactccatacaagtctccagc
tcccccccacgtccggagccccaggcccagtctccacagcctcctccccagcagcaacag
acccagtttccacagctttctccccagcagcaacagacccagctcctgcccccacagctg
gccaggccctccagccccccagcgaaggaggatccccacaaggccaccggcatcccccca
tgtcaccacgccttctcacaaggtgccccaagttacccggcggcaggagactgcaacccc
tcgtctgtgtgtgtagagagtagagcttcccatccgcagcagcagccctcccaaaatggc
aatgaggatagtgagcaggggtcctctatggacagcccccagctctccccgttcaactcg
aagagctctcccctctgcctgtccccctccttccagatgtctacgctgagtctcccgggg
gcgggccaagccccctcgcccctacagagccccatcctgagtgaggtgggcaccaacagg
ctagaggaggaggaggagggcaggaggaagcgatatcccaccgacaaggcctacttcatt
gccaaagagattctaaccacagagaggacctacctgaaagacctagaggttatcacagtg
tggttccgcagtgctgtgatcaaagagaacgccatgccagagggtctgatggccctgctg
ttctcgaacatcgaccccatttacgagttccaccggggattcctcaaggagatcgaccag
agactagctttatgggaggggcgctctaacgctcatgtgaagggagacttccagaggatt
ggagacgtcatgctgaggaacatgtgtgctctcaaggtgtttaccagctacctgcagaaa
cacgacgaggtgctgaccgagctggagaaggccaccaagcgcctgaagaagctggagacg
gtgtataaggagtttgagcttcagaaggtgtgttacctgcctctcaacacgttcctgctg
aagcccatccagcgcctcatgcactacaaactgatcctagagagactgtgtaaacactac
agcccagaccacctcgaccacaacaactgcagagaggccctgaaggaggtggcagagatg
gccactcagctccagagtagtttgatccgcctggagaacttccagaagctgtctgagctc
cagagagacctgatcggcatcgagaacctcactgcgcccggcagggagttcattcgagag
ggttgtctgtacaagctgaccaaaaaaggcctgcagcaaaggatgtttttcctgttctct
gaccagctcctgtacacgagtaaaggtgtgacggccacaaaccagttcaaggtccatggc
cagctgcctctgcacggcatgatcgtggaagagagtgagaatgagtggtctgtccctcac
tgcttcaccatctactctgcccagaggaccattgtggtggcagccagctcgaaggtggag
atggggaaatggatagaggatctcaacatggcaatagagatggccaagaaatctcaggag
aaatcagacctgttcctggacccagggctgtgtgatcgctccaacaggtcgtcggatgag
gtttctctggagcaggagtcagaggatgacatgtcgtcgtcccgtaactctctggataag
cagacccatcaccgtgccaacagcaccatgcatgtctgctggcatcgcaacaccagcgtg
tccatgtcagatcacagcctggctgtggagaaccagctctcaggttacctcctacggaaa
ttcaagaatagcaatggctggcagaagctctgggtggtcttcaccaacttctgtctgttc
ttttacaagactcaccaggatgatttcccgctggcaagcctcccgttgctagggtacact
gtgagcagcccgggagagtcagacagcatccacaaggaatatgtctttaaactgcagttc
aagtcccacgtctatttcttccgggcggagagcgagtatacattcgagagatggatggag
gtgattaagagtgcggctagtgctactggcaggatgagtctcctcatacctaaaggtccc
ctgcagatgaatgggaactaa
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