Salvelinus namaycush (lake trout): 120055119
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Entry
120055119 CDS
T07522
Name
(RefSeq) ubiquitin-protein ligase E3A-like isoform X1
KO
K10587
ubiquitin-protein ligase E3 A [EC:
2.3.2.26
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120055119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120055119
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120055119
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
HECT type E3
120055119
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
AZUL
Motif
Other DBs
NCBI-GeneID:
120055119
NCBI-ProteinID:
XP_038858971
UniProt:
A0A8U1BR10
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Position
Sna10:complement(49446853..49511825)
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AA seq
872 aa
AA seq
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MSKEANEYESTVTYIIEDTKPSRMKRAAAKHLIERYFRQLTEGCGNGACTNELCASCLGF
QPLDHNTAAIRALELYKMNAKLCGRHSAAFPDNSSAKETHPALLGDRHGKMPDHEDNLFP
PREDFREVHYLTEEKVYEILSICEGKKDYSPLIRVIGRIFSSADGLVRSFRKDKEQHPNT
KEQRKTHQAKDEDKDEDDKERTTAMEQESEASASMEGATGSTENRLGPVEVSVDIEAVRR
VYDRLLSNEKMESAFLNALVYLTPNVELDLTYLDVYDTNPDYLNIFVIVMENSSLHSPEY
LEMAMPLFCKCMSKLPLPALAKLTRLWSRYSVEHIRRMMETFQQLITYTVISNEYDSDSL
VNDDACVVAAAKCLKLVFYANVLGGDLDTGHNEEEEPASESSELTLQELLGEERSNKKGP
RVDPLEKELGVRTLDCRRPLIPFEEFVNEPLNDVLEMDKDFTFFKVDSESKFSFQSCPFI
LNACTKSLGLYYDNRISMYSERRITALYSLVQGQQLNPYLRLKVRRDHIIDDALVRLEMI
SMENPADLRKQLFVEFEGEQGVDEGGVSKEFFQLVLEEMFNPDIGMFTYDESTKLFWYNP
SSLENEAQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGTYLDLADSHPVLYQSLK
ELLDYEGDVEEDMMITFQISQTDLFGDPITYDLKENGDKIPVNEDNRAEFVSLYGDYILN
KSVERQFKAFRRGFQMVTNESPLSCLFRPEEVELLICGSRNLDFQALEETTEYDGGYSKD
CRIIKDFWETVHSFGEEDKRLFLQFTTGTDRAPVGGLGKLKMIIAKNGPDTDRLPTSHTC
FNALLLPEYDSKEKLKERLLKAITYAKGFGML
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaggaagcaaatgaatatgagagtacagttacctacatcatagaggacactaaa
ccaagccgaatgaagagagcggctgcaaagcatctaattgagcgctactttcgccagtta
acagagggctgtggaaatggggcctgcacgaatgagttgtgtgcttcgtgtcttggtttt
caaccgctggatcacaacacggcagctatcagagccctggagctctataaaatgaatgcc
aaactgtgtggtcgtcactctgctgccttccctgacaatagcagtgccaaagaaacccac
cctgccttattgggcgaccgtcacgggaagatgccagaccacgaagacaacctgtttcct
cctagggaagacttcagagaggtgcattacctgaccgaggagaaggtgtatgagatcctg
agtatctgtgaggggaagaaggactactctcctctgatccgagtcatcgggaggatcttc
tccagcgctgacggtctggtgcggagcttcaggaaagacaaggagcaacaccccaacacc
aaggagcagcgcaagacccaccaggccaaagacgaggacaaggacgaggacgacaaggag
agaaccaccgccatggagcaggaatcagaggcctcggcgtccatggaaggagcgacggga
tcgacggagaacagactgggtcctgtggaggtctcagtggacatagaagctgtgaggaga
gtgtacgacagactcctctccaacgagaagatggaatcagccttcctcaacgccctggtc
tacctaactcccaacgtagagctggatctaacctatctggacgtgtacgacaccaaccca
gactacctaaacatcttcgtcatcgtgatggagaacagcagcctccacagcccagagtac
ctggagatggccatgcctctgttctgtaagtgtatgagtaaactccctctgcctgccctg
gccaagctgacgcgcctgtggtctcggtacagtgtagagcacatcaggcgtatgatggag
accttccagcaactcatcacctacacggtaatcagcaacgagtacgacagcgacagtctg
gtcaacgacgacgcgtgtgtggtggctgcagccaagtgtctgaagctggtgttctacgcc
aacgtcctgggaggagacctggatacgggtcacaatgaggaggaggagcctgcgtcagag
tccagcgagctcaccctgcaggagctcctgggggaggagaggagtaacaagaaggggccc
cgggtcgaccctttggagaaggagctgggcgtcaggaccctggactgcagacgacccctc
atccccttcgaggagtttgtcaacgagccgctgaacgatgttctagagatggacaaggac
tttaccttcttcaaggtggactcggagagtaagttctccttccagagctgtcccttcatc
ctcaacgcctgcaccaagagcctgggtctgtactacgacaaccgcatcagcatgtacagc
gagaggaggatcacggcgctctacagcctggtacaaggacagcaactcaacccgtacctc
aggctcaaagtacgacgagaccacatcatcgacgacgccctcgtcaggttagagatgatc
tccatggagaacccagcggacctgaggaagcagctgtttgtggagtttgaaggagagcag
ggcgttgacgaaggaggagtgtctaaagagtttttccagcttgtccttgaggagatgttc
aatcccgatattggcatgtttacgtatgatgagtccaccaagctgttctggtacaacccg
tcctctctggagaatgaggcccagttcaccctgatcggcatcgtcctgggcctggccatc
tacaacaactgcatcttggatgttcacttccccatggtggtctacaggaaactgatgggg
aagaaagggacctatcttgacctggcagactctcacccggttctgtaccagagtctgaag
gagctgctggactatgagggcgacgtggaggaggacatgatgatcaccttccagatctca
cagactgacctgtttggagaccccatcacttacgacctgaaggaaaacggggacaagata
cctgtgaatgaggacaatagagcggagtttgtgtctctgtatggcgattacatccttaat
aagagtgtggagcgccagttcaaagccttcaggaggggcttccagatggtcaccaacgag
tctcctctcagctgtttgtttagacctgaagaggtggagctactcatctgtggaagcaga
aatttagactttcaagcgcttgaagaaacgacagagtatgacggaggctacagcaaggat
tgtcgcattattaaagacttctgggagacggtgcattcatttggtgaggaggataagaga
cttttcctccagtttacgacggggactgacagagcacccgtaggaggcctgggcaagtta
aagatgatcatcgccaagaacggccccgacacagacaggttacctacttctcacacgtgt
tttaatgctttgctgctccctgaatacgattcaaaggagaaactgaaggagagacttctc
aaagccatcacttatgccaaaggatttggaatgctgtga
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