Salvelinus namaycush (lake trout): 120055140
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Entry
120055140 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220-like
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120055140
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120055140
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120055140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4
zf-RING_2
Pox_A_type_inc
zf-RING_UBOX
Endonuclease_7
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
120055140
NCBI-ProteinID:
XP_038858993
UniProt:
A0A8U1BNY4
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All DBs
Position
10:complement(8166123..8210519)
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AA seq
548 aa
AA seq
DB search
MDLHRPSFKMDSSSYLPSPLASPALMVLASTAEAGHDSSIPCQAPRPFGVPISEKELHLP
FPSGSYTFASMYHRQGPVSSHGTFPARDFPASLLHLHPQFHPPNLDCSSLGMLNHSGVGA
FRPFSSPPEEREVRGYQSAFTPAKRLKGCYTDSERKQYEFGGGRILSGSPWSLKAAEDSG
RKLFAVSGLLSDSEALSSPEDRKEGCKGNVLYDSQAPVCPVCHAVLRPGELQEHMEQEMG
RLTQLQISPSHYLCTLNVRGDPPPLPPAHLKTPTQTDTSRLPPLVLVLRQTHPISSPQRN
SPDSTQTVRIGKLKRRKADEVQDILVDLGGEGVQWRERRRLQMTSMLGGFKGSVFVSSST
SNEGRGDSDADLDVDGDDTADYGRAQYTEADIIPCSQREPGEVEERKALRGAVLNVGTLS
NRVTLEHSKWTNEGCPSTSNGERNKLDNSIISLHRTCKNSDIETVSEDSALTTLDALKTR
IRDLEKQMSRGDRYKCLICMDTYTTPLTSIQCWHVHCEECWLRTLGAKKLCPQCNTITSP
GDLRRVYL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggacctccaccggccctcctttaagatggacagctcctcctacctgcccagtcccctg
gcctccccagccctaatggtgctggcctccacagccgaggctggccacgattcctccatc
ccctgccaggccccacggcctttcggggtccccatctccgagaaggagctccacctcccc
ttcccctctggctcctacacatttgcctccatgtaccaccgccaggggcccgtctccagc
catggcaccttccccgccagagacttccctgcctccctgctccacctccacccccagttc
cacccccccaacctggactgctcatctctagggatgctcaaccacagcggggtaggggcc
ttcagacccttctcctccccgcctgaggagagggaggtcaggggttatcagtcagccttc
acccctgctaagaggctcaagggctgctataccgactcggaaaggaagcagtatgagttt
ggaggagggcgtattctctctggttcgccgtggtcgctcaaagccgctgaggattctggg
aggaagttgtttgcggtgtctggcctgctgtcagacagtgaggccttgtctagtcctgag
gaccgtaaggaaggctgtaaggggaacgtcctgtatgactcccaggccccagtgtgtcct
gtgtgccatgctgtattacgaccaggtgagctacaggagcacatggagcaggagatgggc
agactgacacagttacaaatcagtccctctcactatctctgcacattaaacgtgaggggg
gatcccccacctctcccccctgcccacctgaagacccccactcagacagataccagtcga
ttacctccgctggtgctggtgctacgccaaacccaccccatttcatccccacaacgaaac
tccccagacagcacacaaactgtcaggatcggcaagctgaagaggaggaaagcggacgaa
gttcaggacattttggtggacctgggaggagagggggtgcagtggagggagcggaggagg
ttacagatgacatccatgctgggggggtttaaagggtcggtatttgtgagcagcagcaca
tctaatgagggccgcggtgacagtgatgctgacctggacgttgatggagacgacaccgcg
gactacggaagagcacaatatacagaggcagacatcatcccctgttcacaacgggagcct
ggggaggtggaggagaggaaagcactgaggggggctgttttaaatgttggaactctgtcc
aacagagtaactctggaacattcgaaatggacaaatgagggatgtccatccaccagcaac
ggagaacgcaacaaactggacaacagcataatctccctacacaggacctgtaaaaacagt
gacatagagacggtctctgaggattcggcactcacgacactcgatgcactaaaaactcgg
atacgagacctagagaagcagatgtccagaggagacagatacaaatgtctcatctgtatg
gacacatatactacgcccctcacctccatccagtgctggcacgtccactgtgaggagtgc
tggctccgcacactgggggctaagaagctttgtccacagtgtaacaccataacttcacct
ggggatctgagacgggtgtatctgtaa
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