Salvelinus namaycush (lake trout): 120055163
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Entry
120055163 CDS
T07522
Symbol
apc2
Name
(RefSeq) adenomatous polyposis coli protein 2
KO
K02085
adenomatosis polyposis coli protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04310
Wnt signaling pathway
snh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120055163 (apc2)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
120055163 (apc2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120055163 (apc2)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120055163 (apc2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120055163 (apc2)
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120055163 (apc2)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
120055163 (apc2)
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
120055163 (apc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm_APC_u3
APC_rep
APC_N_CC
APC_r
Arm
Suppressor_APC
SAMP
ZER1-like_2nd
HALZ
Mis12
DUF5798
Sec7-like_HUS
CCDC138_cc
Motif
Other DBs
NCBI-GeneID:
120055163
NCBI-ProteinID:
XP_038859014
UniProt:
A0A8U1EI22
LinkDB
All DBs
Position
Sna10:complement(11014027..11035221)
Genome browser
AA seq
1642 aa
AA seq
DB search
MANSTASYDQLVYQVEALRQENSHLRRELEDNSNHLSKLENETTDMKGVLKGLQNKLELE
AGTLASSGRTDVLDQLKELHMDLTNYYELKYQPHNLRVLPDSLASLAAQSSDMDDRLACL
PPSSSRARSPLRPSSRQSSSLSGEGTAVHPGHPHLMDGALAKAMLGDGRITAQHLEDLYK
ERAMLVSEIDKEERERHWYYSQLQGLSQRLNQLPRIDTFSIQMDLIRQQLEFEAQQLRSV
MEERFGTSDEMVQRTQIRVARLEQLEKELQEAQESRGSQEKNLCEVEMVFWLLSMLANRD
REEMSRTLLTMSSSQDSCIAMRKSGCVPLLVQILHDGPGGAGEADGSTGCSREARSRASA
ALHNIVYSQPDEGQARREMRVLHVLEQIRSHCDSGWDWIESHVGRPSPGGTTTTDIPETL
EPQTCQAMCAVMKLSFEEEYRQAMNELGGLQVVAELMHLDQELYGMKNDPINMALRRYAG
MALTNLTFGDVVNKATLCTKKSCLQAIVAQLASDSEELHQVVSSILRNLSWRADINSKRV
LRDIGSVTGLITCALQATKESTLKSLLSALWNLSAHSPENKVAICSVDGALGFLVSTLTY
RCQTNSLAIIESGGGILRNVSSLVATRDDYRQILRDHNCLQTLLQHLRSHSLTIVSNACG
TLWNLSARSPKDQELLWDLGAVSMLRNLIHSKHKMIAMGSAAALRNLLTNRPLKYKDAAV
ISPGSCMPSLYMRKQKALEAELDAKHLAETFDSIEKQSSPKHPSINKPLRHIESLAKDYA
SDSGCFDDDEAPNVSSSLDTGSFSMLSMFLTNSNFLQNQPRKKDSEPERDVEPPQTVDKR
PAPPEDEVSVAAGKLAKKITNTVAKIDKLVEDITMHTSSEDSFSLSSEDHFADWPYGSDE
LHEARAKSCSPCRLSDTSNFAHRERLNRAYALLRLKTTHASLSTDSLNSGSTSDGYCGSK
DQIRPSARSAIAQRRPNKLDLKVAHQEYLNIRAHVLNATSPIDVPERDSVDNKEVQLLEL
NSTETEKSQELPPQTPASASTKMSSDVSMTSIKLSPSYQHVPLIQSVSKFGVAKSAINVQ
AAQAMRRQAWVPTVMTGGSLGKFSPMSSARSPTIGPMETLQKYSVENTPICFSRCSSLSS
LSSGDGALDGQSQSENELESDSSLEIIEMEDGDLVNREEENETLEDLSDSQLLVTDSKTC
LSIGSDPIEIPCPTKREKVFLRGVSPGILEDRSPSSSSENYIHETPLVMSRCSSVSSLGS
FESHSIASSILSDPCSGMISGTISPSDLPDSPGQTMPPSRSKTPCFAESNGPETQNAGTA
GQWESSLRKFMEIADFKERINLPPDLDTMIYFTVEKPTENFSCASSLSALPLHEHYIQKD
VELKLTPLLQQKDNNPSFPRAHGDRGDNEHPSFMDQGERYSEGNSDDDIEILKECINSAM
PSKFRKVMPSLISTLPTHVLNSQTRKPIPVYMMVPNNANQMCSGRRIVMQQKDLYLDDSS
YTDSAEGTPVNFSSTTSLSDETLQYPVRDKGAKDWRRKKLSARKKAEKKQKQRNDMQKVS
GGWNNEQDFDSDDIASDKDSDLNKVKESPPFGTTPGLHTVVFAEKKLNPTSEDTKELILW
IISKLYSIETVTEENNLPLTNK
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atggccaactccacagcttcctatgaccagctggtctaccaggtggaagctctccgccag
gagaactcccatctgcgtagagagctggaggacaactccaaccacctgtctaagctcgag
aacgagaccaccgacatgaagggggtattgaagggcctgcagaataaactggagctggag
gctggcactttggcctcctcagggaggactgatgtgctggatcagctcaaagagttgcac
atggacctgaccaactactatgagctgaagtaccagccgcacaatctgcgcgtcctccca
gacagtctagccagtctggcagctcagtcgagtgacatggacgatcgtctggcctgcttg
cctccctcctcctccagagccaggagccccctacggccttcatcccgccagagctcctct
ctgtcaggggagggcacggccgtgcatcctggacacccccacctcatggatggagccctg
gccaaagccatgctgggagacggacgtatcacggcccagcatctggaagacctctacaaa
gagagggctatgctggtgagtgagatagacaaggaggagagggagcgtcactggtactac
agccagctccagggcctgtctcagcggctgaaccaactgccacgcatcgacacattctcc
atacagatggacctcattcgccagcagctggagttcgaggcgcagcagttgcgttctgtc
atggaggaacgcttcggaaccagcgatgaaatggtccagcggactcagatccgtgtggct
cgtctggaacagctagagaaagagctacaggaggcccaggagtccagaggctcccaggag
aagaacctgtgtgaggtggagatggtgttctggctgctctccatgttggccaaccgggac
agggaggagatgtcccgcactctgctgaccatgtccagctcccaagacagctgcatcgcc
atgcgcaagtcaggctgtgtccccctgctggttcagatccttcacgacggcccagggggc
gccggagaggctgacggaagtacagggtgcagccgggaggcccgatccagagccagcgct
gccctgcacaacatagtgtactcccagccagacgagggccaagcccggcgggagatgagg
gtgctgcacgtgctggagcagatccgctcgcactgtgacagcggctgggactggatcgag
agccacgtggggaggccctcccccggaggtactacaaccacagacatccctgagacattg
gagccccagacctgccaggccatgtgtgctgtcatgaagctctcctttgaggaggagtac
cgacaagccatgaatgaactaggggggttgcaggtagttgcagagctaatgcacttggac
caggagctgtacggaatgaagaacgatcccatcaatatggcgcttcgacgctacgcaggg
atggcgctgacaaacctcactttcggagatgtagtcaacaaggccactctctgcacaaag
aaaagctgcctgcaggccattgttgcccaacttgcatctgatagtgaggaactacatcag
gtagtgtctagtattctgagaaatctgtcatggcgtgcagacatcaacagcaagagggtc
cttagagacatagggagtgtaacaggattgataacctgtgctcttcaagccacaaaagaa
tccacgttgaagagcctcctcagcgctctgtggaacctgtcagcacacagtcctgagaac
aaggtggccatttgctcagtagatggggctctgggcttcttggtcagcaccctcacctac
agatgtcagaccaactcactggcaatcatcgagagtggaggtggcatcctgcgcaatgtt
tccagtcttgtggccacacgggatgattacaggcaaatcctcagggaccacaactgtctc
caaacactgcttcagcacctgcgctctcacagcctgacgattgtgagcaacgcttgtggg
accctctggaacctctctgcccgcagtcccaaggaccaggagctgctgtgggacctggga
gcagtcagcatgctgcgcaacctcatccactccaagcacaaaatgatagccatgggaagt
gccgcagctttacggaacctgctcacgaatcggcccctcaagtataaggatgctgcggtc
atatcccctggttcctgcatgccctcgctctacatgaggaagcagaaagcactggaggct
gagctagatgcaaagcaccttgctgaaacatttgattccattgaaaaacaaagcagcccc
aagcatccaagcattaacaagccgctgcggcatatcgagagcctggcaaaggattatgca
tctgactcaggctgctttgacgatgatgaggcccctaatgtctccagtagtctggataca
gggagtttctccatgctctccatgttcctgacgaattccaactttcttcaaaaccagcct
cgcaagaaggacagtgaaccggagagagacgtggagccaccacagacagtggataagagg
ccagcgcctccagaagacgaggtgtctgttgcagcaggaaaattagcaaaaaagatcacc
aacactgtggccaagattgataagcttgtggaggacattaccatgcatacatcttcggag
gacagcttcagccttagctcagaggaccattttgcagactggccttatggatcagatgaa
ctccatgaggcccgggccaagtcatgctccccctgccgcctctctgataccagcaacttt
gcacacagagaacgtctaaacagagcctatgctctcttacgtctcaaaaccacccatgca
agtttgtccactgacagtctcaacagtggcagtaccagtgatggctattgtggtagcaag
gaccagattaggccctcagcgagatcagcaatagcgcaaagacgacctaacaagcttgat
cttaaggtggcgcatcaagaatatcttaacatcagagctcatgttctcaatgcgacaagt
ccgatcgatgtgccagagagagattctgtggacaacaaagaggtccaattgcttgaacta
aatagcacagaaacagagaagagccaagagctgcccccgcaaacaccagctagtgcatca
actaaaatgtcttctgatgtcagcatgacttccataaagctgtccccttcctaccaacat
gtccctctaattcaaagtgtctccaagtttggtgttgcaaaaagtgccatcaatgtgcag
gcagctcaagcaatgaggagacaagcctgggtcccaactgtgatgactggagggagttta
ggcaagttttctccaatgagctctgctagaagtccaaccattggcccaatggagacactg
cagaagtattcggtggagaacaccccaatctgtttctcccgttgcagttccctgtcctcc
ctctcctctggtgatggagctcttgacggacagagtcaaagtgaaaatgagttggagagt
gactcatcacttgagatcattgaaatggaagatggggatctggtcaatagggaggaggag
aatgagaccctggaggatttaagtgatagccaactgctagtcactgattcaaaaacctgt
ctgagcattgggtctgatcctattgaaattccctgccccaccaaacgtgaaaaggtgttc
ctcaggggtgtatcaccaggcatacttgaggacagatcaccttcaagttcatcagagaac
tacatccatgagaccccacttgtgatgagccgttgtagctcggtcagctcactgggtagc
tttgagtctcattcaattgccagctccatacttagtgatccatgcagcggaatgatcagt
ggaaccataagtccaagtgatcttcctgacagtccagggcaaaccatgccccccagtcga
agcaaaaccccatgctttgctgaatcaaatggaccagaaacccaaaatgccgggacagca
gggcagtgggaaagcagcttgcgcaagttcatggaaattgcagactttaaggaaaggatc
aacttacctccagatttggacaccatgatctactttacagtagaaaaacccacagagaac
ttttcatgtgcctccagcttgagtgctctacctcttcatgagcactacattcagaaggat
gtggaactgaaattgactcccttactccagcaaaaggacaacaatccatcattcccaagg
gctcatggagatagaggtgacaatgagcatccttcttttatggaccaaggggagagatat
agtgagggcaattcagatgatgatatagaaattctcaaagaatgcatcaattcagcaatg
ccctccaagttcaggaaagtaatgccctccttgatctccaccttacccacccatgttcta
aactcccaaaccagaaaacctatacctgtttatatgatggttcctaacaatgccaatcaa
atgtgctcagggagaaggattgtgatgcaacaaaaggacttatatcttgatgattcatca
tacactgattctgctgagggcacccctgtcaacttttccagcacgacatcgttaagtgac
gaaacacttcagtacccagtgagggacaagggggcaaaagattggaggaggaagaagctc
tctgcaagaaagaaagcagagaagaagcagaaacaaagaaacgacatgcagaaagtgtcc
ggtggatggaacaatgaacaagactttgacagtgacgatatagcatctgataaagactca
gacctcaacaaggtcaaagagtctccaccgtttgggacaacccctggactccacacagtg
gtgtttgccgaaaagaagctcaaccccacctccgaggataccaaagagctcatcctctgg
atcatctcaaagctctactccatcgagacagtcacagaagaaaataatctccccctcaca
aacaagtaa
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integrated database retrieval system
