Salvelinus namaycush (lake trout): 120055174
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Entry
120055174 CDS
T07522
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1-like
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120055174
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
120055174
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
IRK
Det1
Motif
Other DBs
NCBI-GeneID:
120055174
NCBI-ProteinID:
XP_038859024
UniProt:
A0A8U1C0P4
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Position
Sna10:12927130..12933772
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AA seq
671 aa
AA seq
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MRLVLVKPTNATRRLDSTGDACNDQDPDHCNSRGQSLPDKAPEVMQYRYSGTALQPQTSS
PRVKNSFPATSDKSSVHSSSSSQRWPENHQLEGEGQRQGEQQVHPHTKKVGHVGSTPSLS
KSSSPLPPDTVVTSAKYNGDVGRPLSSLGASPPNLSELDSARQEPLQTLHRSVLEEVFSK
GLSEDNSKANSEGGGDAPQKRTKDIGYRLGQRRALFGKRKQLSDYALIFGMFGIVVMVTE
TELSWGVYTKESSYSFALKCLVSLSTAVLLGLIVMYHAREIQLFMVDNAADDWRIAMTYE
RIFLVVLELLVCAIHPIPGQYIFTWTARLTFTYTPSLTNADVDLFLSIPMFLRLYLIGRV
MLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSVSCWIIAAWTVRVC
ERYRPQTQYHDTQEVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCT
ALVVAVVARKSELTRAEKHVHNFMMDTQLYKRVKNTAANVLRETWLIYKHTKLVKKIDHA
RVRKHQRKFLQAIHQLRRVKLEQMKLTDQANTLVDLAKTQNMIYDLVSDLQLRSEELDRR
IGSLDDKLDSILVNLQALPSLLSQAVTQQHKDFLDCLAHRVRKASSESELHWVPARCQRS
LSTAPQTIPYS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggttctggtcaaacccaccaatgcaacgcgtcggctcgattcaacaggagac
gcttgcaacgaccaagacccggatcactgcaactctcgagggcagtccctaccagacaaa
gcccctgaggtcatgcagtatcgctactctggaactgccctccagccccaaaccagcagc
ccacgagtgaagaattcattcccggctactagcgacaaaagcagtgttcactcctcttcc
agtagccagcggtggccggagaaccatcaactagagggagaagggcaacgacaaggggag
caacaggtacatcctcataccaaaaaggttggccatgttggttcaacgccttccctgtcc
aagagcagtagcccactcccacccgacacagttgtgacaagcgctaaatacaatggggat
gttgggagacccctgagcagcttaggagcttcgccacccaacctttcagagctggactca
gcgagacaagagcccctccagactctccacaggtccgtcctggaggaggtgttctcaaaa
ggcctcagtgaggacaatagtaaggccaacagcgagggaggaggagacgcgccacagaag
aggactaaggacattggctacagattgggccagcgtagagcgctatttggaaagcgcaaa
cagttgagcgactatgccttgatctttgggatgtttgggattgttgtcatggtgacggag
acggaactgtcctggggggtttacacgaaggaatcctcatactcatttgctctgaaatgc
cttgtcagcctttcaactgctgtattgctcggcctcattgtgatgtaccatgcacgggaa
atacagctcttcatggtggacaatgcagctgatgactggaggattgctatgacgtatgag
cggatcttcctggttgtgctggagctgctggtctgtgccatccaccccatcccgggccag
tacatcttcacctggacagcccggctgaccttcacctacacaccctcattgaccaatgcc
gacgtggacctcttcctctccatccccatgttcctcaggctctacctaatcggtcgtgtc
atgctgctgcacagcaagcttttcacggacgcctcgtcgcgcagcatcggcgccctcaac
aagatcaacttcaacacgcggttcgtcatgaagaccctcatgaccatctgccctggcacg
gtgctgctggtcttcagcgtctcttgttggatcatcgcggcgtggacggtgcgtgtatgt
gagaggtacaggccccagacgcagtatcatgacacacaggaagtgaccagtaacttcctc
ggggccatgtggctcatctctatcacctttctctccattggttatggagacatggtccct
cacacttactgtggaaagggtgtgtgtctactgactggaatcatgggggctggctgcact
gcactggtggttgctgtagttgccaggaagtccgagttgaccagagctgagaagcatgtt
cacaactttatgatggacactcagctctataaacgagtgaaaaacacagctgccaatgta
ctcagagagacatggcttatctacaaacacaccaagttagtcaagaagattgatcacgcc
agggtacgcaaacatcagcggaaatttctgcaagccattcaccaactgcgcagagtcaaa
ctggaacagatgaaactcacagaccaggctaacacacttgtggatctagccaagactcag
aatatgatatacgacctggtgtctgacctgcagctgcgcagcgaggagctggataggagg
attggtagtttggacgacaaactggactccatcttagtcaatctgcaggccctacccagc
ctgctctcccaggcggtcacacagcagcacaaggacttcctggattgcttggcccaccgt
gtacggaaagcctcgtcggaatctgagcttcactgggttcccgctaggtgccaacggtcc
ctttccactgcaccacagaccataccttacagctga
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