Salvelinus namaycush (lake trout): 120055178
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Entry
120055178 CDS
T07522
Name
(RefSeq) excitatory amino acid transporter 1-like
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120055178
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snh02000
]
120055178
Transporters [BR:
snh02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
120055178
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Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
120055178
NCBI-ProteinID:
XP_038859026
UniProt:
A0A8U1BKM5
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Position
10:14357445..14367259
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AA seq
652 aa
AA seq
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MTETRESAPKNVLGGQMMWASVLRCESETEEEFLDRLSEEWLAVERDERVWRGWSLEQDS
RFEECVTLQAPCFAVTLSHETCLLDQVLELIVNEKPPNTGSLFLNEDADKPPLPNRGLWR
RLHRAMQKRAASTKDRMSTITKESVKGFLRRNLFVLLTISAVALGVMLGFALRPHNLTLR
EIKYFAFPGELLMRMLQMLVLPLIVSSLVTGISSLDSKASGKMGMRAVGYYMVTTLIAVF
IGIVIVIVIKPGKGHRDSPVASSGTIEPVQAADAFLDLIRNMFPPNLVEACFKQYKTVYK
KTIHTKNVTVALSLTDSLNATEAALAVNMSRVLQTIQETVVEMIPVSGSSNGVNALGLVV
FSMCFGLVIGSMKQQGQALRDFFDCLNEAIMRLVAIIIWYAPVGILFLIAAKIVEMKNLA
EVGGQLGMYTVSVIVGLLIHGLFVLPLLYFLVTRKNPYTFMAGLLQALITALGTSSSSAT
LPITFRCLEENNRVDKRVTRFILPVGATINMDGTALYEAVAAIFIAQVNDMELNFGQILT
ISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTEDITLIIAVDWFLDRLRTTTNVLGDS
IGAGIVEHLSRQELQSQDVEVGNSVIEENEKPYQLICQKNDSVKHRNSETPM
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaacccgagagtcagcccccaaaaatgttttgggggggcagatgatgtgggcg
tcggtgctgaggtgtgagtctgagaccgaggaggaattcttggaccgtttgagcgaggag
tggttggcagtggagagggacgaaagagtttggaggggttggagtctggagcaagacagt
cgctttgaggagtgtgtgacccttcaggcaccatgctttgcggttacactttcccacgaa
acctgcctcctggaccaggtgctggagctgattgtgaatgagaagccccccaacactggc
agccttttcctgaacgaggacgctgacaagccccccctccccaatcgaggcctctggcgg
cggctacatagggccatgcagaagagagcggccagcaccaaggacaggatgagcaccatc
actaaggagagcgtcaagggcttcctgagacgcaacctctttgtcctcctcaccatctca
gcagtggctctgggtgtcatgctgggtttcgccctgcggccccacaacctgaccctcagg
gagatcaagtactttgccttccctggagagctgctgatgaggatgttgcagatgctggtt
ctgcctctcatcgtctccagcctggtcacaggtatttcctctctggacagcaaagcgtct
gggaagatgggaatgcgggctgtgggttattacatggtgaccaccctcatcgctgtcttc
ataggcatagtcattgtgatcgtcatcaaaccagggaaaggccatagggacagcccagtg
gcctctagcggtaccatagagccggtacaagcagctgacgccttcctggatctcatcagg
aacatgttccctcctaatttggtggaagcctgtttcaagcagtacaaaacggtatacaag
aagaccatccacacgaagaacgtgactgttgccctcagtctgactgactccctcaacgct
acagaggctgccttggctgttaacatgagcagagtgctgcagaccatccaggagacagtg
gtagagatgatccccgtgtctggttcctctaacggggtgaacgccctgggtctggtggtg
ttctccatgtgcttcggcctggtcatcggcagcatgaagcagcaaggacaggccctcagg
gactttttcgactgcctcaacgaagccatcatgcgcctggtggccatcatcatctggtat
gctccagttggcatcctgttcctcatagcagctaagatcgtggagatgaagaatctggcc
gaggtgggaggtcagctggggatgtacacggtgtctgtcatcgtgggtctgctcatccac
ggcttgtttgtcctgcccctgctctacttcctggtcaccaggaagaacccctacactttc
atggctggccttctgcaggccctcattacagcactgggaacatcctctagctctgccacc
ctgcccatcaccttccgctgtctggaggagaacaaccgtgtggacaagagagtgacacgc
ttcatcctgcccgtgggtgccaccatcaacatggatggcactgccctctacgaagccgtg
gcagccatcttcatcgcccaagtcaacgacatggaactcaactttggccagatcctcacc
atcagtatcacagcaacagctgccagcatcggcgcagcaggcatcccacaggctggtctg
gttaccatggtaatcgtattgacatcggtgggactgcccacagaggacataacgctgatc
atcgctgtggattggttcctggatcgcttaaggaccaccaccaacgtgctgggggactct
atcggggcaggcatcgtggagcacctgtctcgccaggagttgcagagccaggatgttgag
gtgggcaactcagtgattgaagagaatgagaagccctaccagctcatctgccagaaaaac
gactcagtgaagcatcgcaacagtgagacccccatgtag
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