Salvelinus namaycush (lake trout): 120055212
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Entry
120055212 CDS
T07522
Name
(RefSeq) leucine-rich repeat-containing protein 7-like
KO
K24055
leucine-rich repeat-containing protein 7
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120055212
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
120055212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
PDZ_6
LRR_Zer-1
LRR_NXF1-5
LRR_5
LRR_At5g56370
LRR_EndoS
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120055212
NCBI-ProteinID:
XP_038859061
UniProt:
A0A8U1BR68
LinkDB
All DBs
Position
Sna10:complement(21516469..21564556)
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AA seq
1518 aa
AA seq
DB search
MAKRGPSMQCLEMTTKRKIIGRLVPCRCFRGEEEVISVLDYSHCSLQQVPKEIFSFERTL
EELYLDANQIEELPKQLFNCQALRKLSMPDNDLSNLPTTIASLVNLRELDISKNGIQEFP
DNIKCCKCLSVVEASVNPIAKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILEL
RENHLKTMPKSIHRLSQLERLDLGSNEFTELPEVLEQIHNLKELWMDNNSLQKIPGCIGK
LRQLRYLDLAKNRIESLDTDISGCECLEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQL
TSLPNTIGSLSLLEEFDCSCNELESLPPTIGYLPNLRTFSADENFLIELPREIGNCKNVT
VMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDNQSKALIP
LQTEAHPETKQRVLTNYMFPQQPRHDEDYQSDSDSFNPTLWEEQRQQRMTVAFEFEEKKE
EEDNSGKVKVEINLKRYPTPYPEDLKNMVKSVQNMVGKNQLPLSTGTNSSGTNMESRKQE
QYEPPWPMPPKEVTDRVMEREMLEREREFNKTQMTEQGIIHNSAIDIPKRKDKEDLTESS
EVQEQFPYLFVKIGSPNDIRISDMRPTLVEPSMYKPKVVLLGKDKKESTDESDLDKMHCL
NNSGSSATYSDYSPSQGSSGSSNPPGNVAALQAAGKDGGVPQQHWTNRLVQQFPKPIETK
PLLSQRDPRETPPSSTLQQRSERRPLSDTFDQWNDTSHYDNTGFVSEEAPLKTPSSSSSG
NPMLGSKSRSSSTSHGGRRPLMRQERIVGVPLELQEAPHQHPHPSHQFHNVRTTPENEVP
QPPPPNPWQNWTRTPSPFEDRTAFPSKLSSPGNSPNPDRKDFEQEMHHGELPGTFPSTGT
WGYLDSRNSGQGQGRSNQQANISSMYQHVQSKPIRPSSGAMVMSKSSERLSPMMKEVKAK
FKKSQSIDEIDMGSYKVYSIPVDSYSSSIENHGSVDRPDMPAPMEQSMSRSQSAPMLDDD
DAYGTNSQQQKPAIPKKVYHFDQSFNPQGAMDMRNQQQERRAPPPFPNTPEYVNQPGKTL
PKELVSPRGYRGYPPMDQMFSYSQPSVNEENQPSQQQQPFPIPSQRSRPGFLRRADSLVS
STELALFRRVQEAQEMQQMSDHYGRQHFKGILEQQNSPSMAQQDQQYNKRNGRYEEDYSS
YQEPKKPILGYPTKSLTQRRPLSARSYSTETFGASQARPVSARPTMAALLEKMPPDYNLS
TCTENIKSPDEMKMRTMQLQHKPDDMSSKMPVDWRQQLLRHIEAKRLDRTPSQQSNILDN
GQEVVSPTTQWAPYSLGRRDVPPENIMKKAGGHHPHQSQTMIVTSASATPPHRSVRDQQY
EGAINKISIQQYQSPLPMATTTSPRPQSARCLIQTKGQKSMDGFQEQFCVRIEKNPGLGF
SISGGISGQGNPFKPSDMGIFVTRVQPDGPASNLLQPGDKILKGNGHSFLHMEHETAVSL
LKNFQKPVDLVILRESTI
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcgagggccaagcatgcagtgtctggagatgacgactaagaggaagatcatt
gggcgcctggtgccatgccggtgcttccggggtgaggaggaggtcatctcagtgctggac
tactcccactgcagcctgcagcaggtgcccaaggagatattcagcttcgagcgcacgctg
gaggagctctacctggatgccaaccagatcgaggagctgcccaagcaactatttaactgt
caggctctccggaagctgagcatgcctgacaatgacctgtcaaacctgccaaccaccata
gccagccttgtaaacctgagggagttagacatcagtaaaaacggtattcaagagttccca
gacaacattaaatgctgtaaatgcttatctgttgtggaggcaagtgtaaatcccattgcc
aagctcccagacggcttcacccagctcctcaacctgacacagctcttcttaaacgatgcc
tttctggagtacctccccgccaactttggcagactttccaagttacggatcctggaactg
cgagagaaccacctgaaaacgatgccaaagtcaatacacagactgtcacagctggagcga
ttagacttgggaagcaatgaattcactgaactgcctgaagtcctggagcagatccataac
ctaaaggagctgtggatggacaacaactctctgcagaagatacctgggtgtataggaaag
ctgaggcagctgcgctacctggacctggctaaaaacaggattgagagcttggacactgac
atctctggctgtgagtgcctggaggacctcctgctctcttccaacatgctgcagcatctg
cctgacagcataggaatgttgaagaagctcacaacactaaaagtggatgacaaccagctc
acctcactgcctaacaccattggaagtttatcgcttttagaggagtttgactgcagctgt
aatgaattagagtccctgccccccaccattggctacctgcccaaccttcgcacgttttct
gctgatgaaaactttctcattgaactacccagggagattgggaactgtaagaatgtgaca
gtcatgtcgttacgctccaataagctggagtttctacctgacgagatcgggcagatgacc
aaactacgtgttctcaacttaagcgacaatagattaaagaatctcccattcactttcaca
aaactaaaagatcttgctgctctttggctttcagacaatcagtccaaggccctgatccct
ctccagacagaggctcatccagagaccaagcagagggtcctcaccaactacatgttccct
cagcaaccacgacatgatgaggactaccagtcagacagcgacagcttcaaccccacctta
tgggaggagcagcgtcagcagaggatgaccgtagcctttgagttcgaggagaagaaggag
gaggaggacaactctggaaaagtcaaggttgagatcaatctgaagcgctaccccacaccg
tacccagaggacctgaagaacatggtgaagtcagtgcagaacatggtgggcaagaaccag
cttcccctcagcactggtactaactcctctggtaccaacatggagtcacgaaaacaagaa
cagtatgagcccccctggcccatgccccccaaagaggtaacagaccgggtgatggaaaga
gagatgttagagagagagagagagttcaacaagactcagatgacagagcagggcatcatc
cacaactctgccatcgacatcccaaagcgcaaggacaaggaggatctgactgagagctca
gaggtacaggagcaatttccttatctctttgtgaaaatcggctctccgaatgatatccgt
atctctgatatgaggcccaccctggtggaaccgtctatgtacaaaccaaaggttgtatta
ctggggaaagacaagaaagagtctacagatgaatcagatctggataagatgcattgcctg
aacaacagtggctcgtcggccacctactcggactactctccatcccagggttcttctggc
tcctctaaccccccgggcaacgtggccgccctgcaggctgctgggaaggatggaggagtg
cctcaacaacactggaccaacaggctggtccagcagttccccaagcccatcgaaaccaag
ccgctactgagtcagagagaccccagagagacccctccctccagcacactgcagcagcgc
agtgagcgacgccccctcagtgacacctttgaccagtggaacgatacctcccactacgac
aacacaggcttcgtgtctgaggaggctcctctgaagacccccagtagtagcagcagtggt
aaccccatgctgggctccaagtcccgcagctcctccacctcccacgggggccgccggccc
ctcatgaggcaggagcgcatcgtgggcgtccccctggagctgcaggaggcccctcaccaa
cacccacacccctcccaccaatttcataatgtccgcaccacgcctgaaaatgaagtgcct
cagcctccccctcccaacccatggcagaactggacgcgaacgcccagccccttcgaggac
cgcacagctttcccctcaaaactgagctccccaggcaacagccccaaccctgaccgcaag
gactttgagcaggagatgcatcatggggagctgccgggcacgttcccctctacagggaca
tggggttacctagactccaggaactcggggcagggtcaggggcgcagcaaccagcaggcc
aacatatccagcatgtaccaacatgtccaatccaagcccattagaccaagctctggggcc
atggtgatgagcaagagctctgagcgcctctctcccatgatgaaggaggtgaaggctaag
ttcaagaagtcccagagcattgacgaaatagacatgggctcctacaaggtgtacagcatc
cccgtggacagctacagctccagcatagagaaccatgggagtgttgaccgtccagacatg
ccggcccccatggagcagagcatgtcccgcagccagtctgcccccatgctggacgatgat
gacgcctacggcacaaatagccagcagcagaagcctgccatccccaagaaggtctaccac
ttcgaccagagcttcaaccctcagggggctatggatatgaggaatcagcagcaggagagg
agggcccctccgcccttccccaacacccctgagtatgtcaaccagccggggaagaccctg
cccaaagagctggtgagccccaggggctaccggggttaccctcccatggaccagatgttc
tcctactctcagccctcagtcaacgaggagaaccagccgtcccagcagcagcaacccttc
cccatccctagtcagcgctcccggcctgggttcctgaggcgggctgactcactggtcagc
tccacagagctggctctgttccgcagggttcaggaggcccaggagatgcagcagatgtcg
gaccactacggccggcagcacttcaaaggcattctggagcaacagaacagtcccagcatg
gcccagcaggaccaacagtacaacaagaggaatggcaggtacgaggaagactactcctcc
taccaggagcccaagaagcctatcttgggctaccctacaaagagcctgacgcagcgacgc
cccctgtcggccaggagttacagcacagagacgtttggggcgtcccaggccaggcctgtg
tctgccagacccacaatggctgcactgttggagaagatgcccccagattataatctgagc
acgtgtactgagaatataaagagccctgatgagatgaaaatgcgcaccatgcagctgcag
cataagcctgatgatatgtcctctaagatgccagtagactggaggcaacagctgcttaga
catatagaggccaaacgattagaccggaccccttctcaacagagcaatatattagacaac
ggccaggaggtggtctctcccaccactcagtgggccccctactcactgggcaggagagac
gtgcccccagaaaatataatgaaaaaggcaggcggccaccacccccaccaatcacagaca
atgatagtgacgtccgcatcggccacacccccacaccgctcggtgcgggaccagcagtac
gagggcgccatcaacaagatctccatccaacagtaccagtctcctctgcccatggccacc
accaccagtccccggccccagagcgcacgctgtctcatccagaccaaaggccagaaaagc
atggacggcttccaggagcagttctgtgtgcggatagagaagaatccaggcttagggttc
agcatctcaggtggaatcagtggccaagggaaccccttcaagccttctgacatgggtatc
tttgttactagggtacagcctgatggaccggcctccaacctgcttcagcctggggacaaa
atactgaagggcaatggacatagttttttacacatggaacatgaaactgctgtgtctctt
ctgaagaatttccagaaacctgtggacttggtaatcttgagggagagcacaatttaa
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integrated database retrieval system
