Salvelinus namaycush (lake trout): 120055265
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Entry
120055265 CDS
T07522
Name
(RefSeq) tiggy-winkle hedgehog protein-like
KO
K11988
sonic hedgehog
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120055265
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120055265
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
snh00536
]
120055265
Peptidases and inhibitors [BR:
snh01002
]
Cysteine peptidases
Family C46: hedgehog family
120055265
Glycosaminoglycan binding proteins [BR:
snh00536
]
Heparan sulfate / Heparin
Morphogens
120055265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Hom_end_hint
Intein_splicing
VldE
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
120055265
NCBI-ProteinID:
XP_038859078
UniProt:
A0A8U1EMT5
LinkDB
All DBs
Position
11:complement(19726442..19728873)
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AA seq
415 aa
AA seq
DB search
MDVMLILIRIALVGFICLFLASAGLACGPGKGYGKQRHPKKLKPLAYKQFIPNVAEKTLG
ASGKYEGKITRNSERFKDLTPNYNPDIIFKDEENTNADRLMTQRCKDKLNSLAISVMNQW
PGVKLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVNYES
KAHIHCSVKAENSVAAKSGGCFPGSASVLLEDGRSKLVKELEVGDKVLAADIEGNIVSSD
FLMFLDQDPVSRREFYVFETEKPNRKLRLTPAHLVFITSNVTDDDMTAVFASNVKPGQQV
FVVDEAVDHLKAVTVERIYVEEYEGSYAPVTSQGTIIVDHVLASCYAVIEDHKWAHWAFA
PVRLGHALMSFTDLVKKREDIRQRDGMHWYSDILYHIGTLLLDRNSFHPLGMSQS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgatgcttatactgataagaattgcgctcgtgggcttcatctgcctgtttcta
gcatccgctgggttggcctgtggtccaggcaagggatatggaaaacaaagacatccgaaa
aaactgaagcctttggcttacaagcagttcattcccaacgtggcggagaagacccttggg
gccagtggcaaatacgaagggaagatcacaaggaactctgaaagatttaaagacctgaca
ccaaactacaatcctgacattattttcaaagatgaggaaaacactaatgctgacagactt
atgacacagagatgtaaggacaaactgaactctttggctatttcagtcatgaatcagtgg
ccgggagtgaagctgcgcgtgacagaaggctgggacgaggatggacaccatttcgaagaa
tctttacactatgaaggaagggctgtagatattaccacctctgacagagataagagcaaa
tatggaatgttatcccggctcgcggtggaggcaggattcgactgggtcaattatgaatcc
aaagcccatattcattgctctgtgaaagcagaaaattcagttgctgcaaagtcgggtggc
tgcttccctggatccgcctcagttctcctcgaggatggtcgaagcaagctggtaaaagaa
ctggaggtgggcgacaaggtgttagcagcagacatagaaggaaatattgtgtccagcgat
ttcctcatgttcttggaccaagatccagtgtcaagacgagaattttatgtttttgaaaca
gagaagcccaaccgaaagttaagactgaccccggctcacctggtcttcatcaccagtaac
gttacggatgacgatatgactgcagtgtttgccagtaatgtaaaacctgggcaacaggtg
tttgttgtggacgaggccgtagaccacctgaaggcagtcactgtggaaaggatttacgtg
gaagaatacgagggatcttatgccccagtaacctcacaaggaaccatcatagttgaccat
gttttggcgagctgttacgcggtaatcgaggaccacaaatgggcgcactgggcctttgcg
ccagtccggttggggcacgcgttgatgtccttcacagatctagtcaaaaagcgcgaggac
atacgtcagagagatggaatgcactggtactcagacattctataccacatagggacattg
ctgctggacagaaactccttccatcctcttggaatgtcccaaagctga
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