Salvelinus namaycush (lake trout): 120055303
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Entry
120055303 CDS
T07522
Name
(RefSeq) double-stranded RNA-specific editase B2-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120055303
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120055303
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Motif
Other DBs
NCBI-GeneID:
120055303
NCBI-ProteinID:
XP_038859106
UniProt:
A0A8U1BR97
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Position
Sna11:23896168..23908625
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AA seq
759 aa
AA seq
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MLSSFISPMKIRDTGTTTSKDDGDTSNSSSAEVKENRHSTNQVDYSTIRQPAHHQSALYT
DISRGLSRTTALQRKQPLVEGKDSLLYELQLICKRTTMRTSWSVTKKNALVQLNELRPGL
QYEIASWTGPVHAPVFAVGVEVNGLRFEGRGPTKKKAKMRAAEMALRSFIQFPNAPQAHI
TMGNLNFINTTAPTDFTSDQAVLVPDTLFKEFEPEANEDQFSHRTGGKGQELLSSICNHG
RLVCLTLDLMSSANQKRQRIGSSIVEELRPVALLNELRPGLRYVCLMERVRGRPIRSFVM
AVRVDGRIFEGCGRSKRLAQAQVAASALQDLFHISLGPETSISHTAIWAKSSQLPQCFAE
SIFHLVREKHSQLADCYCPTSQSRHKVLAGIVMTRGFDVRRGQVVSLGTGTKCFSGVCVS
DQGRTVNDCHAEVITRRAFLRFLYTQLELFLCNRPDSLEQSIFVRDKESGYRLRDGILFH
MYVSSSPCGDARLNCPYEVTATHHSWHRFVRKLRCHLRMKMEGGEGTLPVSVRRANQKWD
RGLPREPPVTMSCTDKMARWNVLGLQGSLLSHLVEPVYLHSLTVGSLCHTGHLGRTMARR
MGHIGPMSSSYRHNRLLLGCLSSSEGRQPGKSPRFSVNWSAGDGELEVLDTSTGRRKDSG
TPSRLCKRSLFTRWERLHHQVSHEQGSYSVCFTQNQWRLLSRPGQVLGDEKAIKTYCGAK
MTAGAYQRAKQKFVLSLQEAGLGIWNRKPPEQEHFQSSV
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcatccttcatcagccctatgaagattagagatactgggacaacaacatcaaaa
gacgatggagacacttcaaatagcagcagcgctgaggtgaaggagaatcgtcatagcaca
aaccaagtagactattccaccatacgacaacctgcacatcatcaatcagctctttacact
gacatctccagaggtctctccaggactactgctctacagaggaagcagccattggtggaa
ggaaaagacagtcttctctatgaactccagttgatctgtaagaggacgacaatgaggact
tcctggtctgtcacaaagaagaacgcccttgtgcagttgaacgagctgagaccaggtcta
cagtatgagatagcatcctggacagggccagttcacgcccctgtgttcgctgtaggagta
gaggtgaacggtctcaggttcgagggccgaggccccaccaagaagaaggctaagatgaga
gcagcagagatggctcttaggtccttcatccagttccccaacgcccctcaggctcacatc
accatgggaaacctcaactttatcaacaccacagcaccaacagacttcacctcagaccag
gccgttctcgtccctgacacgctcttcaaggagtttgagccagaagcaaatgaagaccaa
ttcagccacaggacagggggaaagggacaggagttgctctccagcatttgtaaccatggg
agactagtatgcctgacccttgacctgatgtcctcagccaatcagaagaggcagaggatc
ggttcttccattgttgaggagctgaggcctgtggctctgctcaatgagttaaggccaggc
ctgaggtacgtctgcctgatggagagagtgcggggcaggccgatcaggagctttgtgatg
gcagtgagggtggatgggaggatatttgagggctgtgggcgcagtaagagactggctcaa
gcccaggtagcagcctcagccctacaggacctgtttcacatcagtctggggcctgagact
agcatcagtcatactgccatctgggccaagagctctcagctacctcagtgctttgcagag
tcaatcttccatttggtgagagagaaacacagtcagctagctgactgttactgccctacc
tcccaaagccgtcacaaagtactggcaggcatcgtaatgaccagaggttttgacgttaga
cgaggccaggtggtgtctctggggacagggaccaagtgtttcagtggagtgtgtgtcagt
gaccagggacggacggttaatgactgccatgctgaggtcatcaccaggagggctttcctc
cgctttctctacacccaactggagctcttcctctgtaaccggccagacagtttggagcag
tccatctttgtgcgagacaaagagtctgggtacagactgagagatggtattctgttccat
atgtatgtgagctcatcgccctgtggggacgcacgcctcaattgcccctacgaggtaaca
gctacacaccacagctggcacagatttgtaaggaagttacgctgccatctgaggatgaag
atggaaggcggtgagggtacacttcctgtcagcgtacggagagccaatcagaaatgggac
agggggttgccgagggaacctcccgtcaccatgtcctgcacagataaaatggccaggtgg
aatgttctaggtctccagggctctctcctgtctcacctggtggagccagtgtacctccac
agcctcactgtgggcagcctgtgccacacaggtcacctgggaaggaccatggcacgacgc
atggggcacatcggccccatgtcctcctcctatagacacaacaggctactcctcggctgc
ctcagcagcagtgagggtcggcagccagggaagtcccccaggttcagtgtgaactggagt
gctggagacggggagctggaggtgctggatacctctacaggcaggaggaaagactcaggg
acaccatccagactctgcaagagatccctcttcactcgttgggagagactacaccaccag
gttagtcatgaacagggaagctattcagtatgctttacccagaaccagtggaggctgctg
agcaggccaggacaagtgttgggtgacgagaaggccataaagacgtactgtggagctaag
atgacagcgggggcctaccagagagccaagcagaagtttgtcctctcactgcaggaggca
ggcctgggcatctggaacaggaaaccaccagaacaggagcacttccagagcagcgtgtaa
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