Salvelinus namaycush (lake trout): 120055411
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Entry
120055411 CDS
T07522
Name
(RefSeq) kin of IRRE-like protein 1
KO
K25874
Kirrel/Neph family protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120055411
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
Kirrel/Neph family
120055411
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Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
Ig_5
Ig_4
Syndecan
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
120055411
NCBI-ProteinID:
XP_038859202
UniProt:
A0A8U1BUA3
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Position
Sna11:complement(39377385..39400284)
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AA seq
827 aa
AA seq
DB search
MQCLRPLHQSGAQWGYRILWTVRFSQEPADQSVVLGGRVVLSCVVFNYSGIVQWTKDGLA
LGIGEGLKAWPRYRVLRVIDVGQYNLEISAAALSDDSLYECQATEAALRSRRAKLTILIP
PDDPVIEGFPEILLRANASYNLSCVSHGAKPLALIEWQRDGVALEGAFSSTEVLPDRKRV
TTRSFLPIIPEDKDTGRNFTCVASNRAVPMGKRTTVTLNIHHPPKVNLSMEPQSLLEGER
VTFTCQATANPPIMGIRWAKGGVLLEGMRDSVFVTTADHSFHTEPVSCSVFNAVGHTNLS
ILVNVHYGPILKGAPTPITVDIDSDAKLNCKWTGNPPLTLTWTKKGSSMVLSNNEELVLK
SVSQVDAGQYVCKAIVPRIGVGETEVTLTVNGPPIISSEPVQYAMRGERGEVKCYIASTP
PPDKIVWAWKENVWEKEKGTLLERYTVEQSKPHSQGGAVLSTLTINNVMESDFHSPYNCT
AWNTFGPGTMIITLEEREIVPVGIIAGGTVGSSILLLIFLLALAFFLYRQRKGSRRGVTL
GKPDIKVETVNKETHSLEEESGGVSTATRMVKAMYSPFKDDMDLKQDLRSELDTREEYEL
KDPTNGYYNVRATTHDEARPSSRSMLYQGEFRTPNPPGGATGATSSGPAGGPGGVVAAGG
VPGVPGSRAGCYDPRPPSRMSHTNYPQFNTFTRAGPSQVPPNTNHPSHPAHPSHPAHPSH
PASQTTDFPGDCGLLDNNSQLTYDNYGYPAQYPTYRMGFAPPLEGGPAYEVYPTGQGVGP
GPVQGPVQGPCPGPETVLGNYGTTRFSYTSPRTEYNQRHTQRMQTHV
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgccttagaccgctacaccagtcgggagcccaatggggctaccgtatattgtgg
actgtgaggttctctcaggagccagcagaccagtctgttgttctgggggggagggtggtt
ctgtcctgtgtcgtcttcaactacagcggcatcgtacagtggaccaaggatggactagca
ctgggcatcggagagggcctcaaggcctggcccaggtaccgtgtgctgcgggtgatagac
gtgggccagtacaacctggagatctctgctgctgcgctgtctgatgactccctgtatgag
tgccaggccacggaggctgccctgcgctcccggagagccaaactcaccatcctcatccct
cctgatgacccagtgatcgagggctttccagagatcctgctgagagccaatgcctcgtac
aacctgagctgtgtgtcccacggggccaagccactggccctcatcgagtggcagcgggat
ggggtggccctggagggagcttttagttccactgaggttctcccagacagaaagagagtg
acgacccggagcttcctacccatcatcccagaggacaaagacacgggacgcaactttacc
tgtgtggccagcaaccgggctgtccccatgggaaaacgcaccaccgtcaccctcaacatc
caccacccccccaaggtgaacctatccatggagcctcagtctctcctggagggagagaga
gtcaccttcacctgccaggccaccgccaacccccccatcatgggcatccggtgggcgaag
gggggtgttctcctggaggggatgagagacagtgtgtttgtgaccacagcagaccattcc
ttccacaccgagcctgtctcctgctcagtctttaacgctgtgggacacaccaacctcagc
atcctggtcaacgtacactatggtcctatcctgaagggggcgcccacgccgattacggtg
gacattgactctgacgccaaactcaactgcaagtggaccgggaaccctcctcttacactc
acctggaccaagaagggatctagcatggtcctcagtaacaacgaggagctggtcctgaag
tcagtgagccaggtggatgcgggtcagtacgtgtgtaaggccatcgtccccaggatcgga
gtgggagagactgaggtcactcttacagtcaacggccctcccatcatctccagcgaacca
gtccagtacgcaatgagaggggagagaggggaggtcaagtgctacattgccagcacccct
ccacctgacaagattgtgtgggcatggaaggagaacgtatgggagaaggagaaggggact
ctgttggagaggtacacggtggagcagagcaaacctcactcccagggaggagctgtcctc
tccaccctcaccatcaacaacgtcatggagtctgacttccactctccgtacaactgcacc
gcctggaacaccttcggacccgggaccatgatcatcaccctggaggagagagagatagta
ccagtggggattatagctggtggaacagttggatcctccatcctgctcctgatctttctc
ctggctctagccttcttcctctaccgccaacggaaaggcagtcgtcgtggggtcactctg
gggaagccggacatcaaggtggagacagtcaacaaggagacacatagtctggaggaggag
tcgggcggtgtttccacggcaacgcgcatggtcaaggccatgtattccccattcaaagac
gatatggatctgaagcaggacctgcgcagtgagctcgatacccgcgaggaatacgaactc
aaggacccaacgaatggctactataatgtccgtgcgaccacccacgacgaggccaggccg
tcctcccgctccatgctgtaccagggagagttccggacccccaaccctccggggggagct
acaggtgctacctccagtggcccagcagggggtcccggaggggtggtggctgcaggaggg
gtcccaggagtcccagggtcaagggcagggtgctatgaccccagacctccatccaggatg
tctcacaccaactacccccagttcaacaccttcaccagggcgggcccgagccaagtccct
cccaacaccaaccacccctcccaccccgcccacccctcccaccccgcccacccctcccat
cctgcctcacagaccaccgacttccccggagactgcggactattggacaacaacagtcag
ctgacctatgacaactatggctatcccgcccagtaccctacctatcggatgggctttgcc
ccgcccctggaaggagggccggcctatgaggtctacccaactggacaaggggtgggacca
gggccagtgcaaggaccagtccaaggcccatgtccgggtcctgaaactgtgctggggaat
tatgggaccacccgcttctcctacacttctcctcgtactgagtacaaccagagacacact
cagaggatgcagacacacgtgtga
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