Salvelinus namaycush (lake trout): 120055491
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Entry
120055491 CDS
T07522
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120055491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120055491
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
120055491
Prokaryotic type
Archaeal type
TFB
120055491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
Sigma70_r4
RB_B
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
120055491
NCBI-ProteinID:
XP_038859282
UniProt:
A0A8U1BTS2
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All DBs
Position
Sna11:complement(9386113..9396581)
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AA seq
318 aa
AA seq
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MASTSRGDGQALPKVQCPNHPDSMLVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFTNE
KATKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAF
KEITTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATYIARK
AVEQDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAD
LFPPDFKFHTPVDKLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaacaagccgtggagacggccaggcccttcctaaggtgcagtgccccaaccac
ccagactccatgctggtggaagactacagagcaggggatatgatctgccccgagtgtggc
cttgtagtgggtgacagggtgattgacgtcggctcagagtggaggacgttcaccaatgag
aaagccaccaaagacccgtctagagtgggcgacgcccagaacccactcctcaacggggga
gacttgaccaccatgatcagcaagggaacaggcgcggctagttttgacgagttcggcaac
tccaagtaccagaaccggcggactatgagcagttcagatcgtgccatgctaaacgccttc
aaagagattaccaccatggccgaccggatcaacctaccaaggaacatcatagaccgaaca
aataacttatttaagcaagtgtacgaacagaagagcctgaagggccgggccaacgatgcc
atcgcatcagcctgcctttacatcgcctgcagacaagagggcgtgcctcggacgtttaaa
gagatctgcgcggtgtcccgcatctccaagaaggagatcggccgctgcttcaagctgatc
ctcaaggccctggagaccagcgtggacctcatcaccaccggagacttcatgtcccgcttc
tgctccaacctgggcctgcctaagcaggtgcagatggcggccacctacatcgcacggaag
gccgtggagcaggacctggtgcccggcaggagccccatctctgtggccgccgccgccatc
tacatggcctcccaggcctccgccgagaagaagacccagaaagagattggagacatcgcc
ggtgtggcagacgtcacaatcagacagtcgtaccgactcatctacccccgagcagccgac
ctcttccccccggacttcaaattccacacccctgtggacaaactgccccagctgtga
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