Salvelinus namaycush (lake trout): 120055530
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Entry
120055530 CDS
T07522
Name
(RefSeq) paired box protein Pax-3-like isoform X1
KO
K09381
paired box protein 3/7
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120055530
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
120055530
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
HTH_23
Homeobox_KN
HCV_capsid
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
120055530
NCBI-ProteinID:
XP_038859319
UniProt:
A0A8U1C0Y1
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Position
Sna11:complement(15715526..15749046)
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AA seq
492 aa
AA seq
DB search
MTALAGGIPRMMRPNPHQNYPRGGYSLEVSTPLGQGRVNQLGGMFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGSIGGSKPKQTTTPDVDKKIEE
YKRDNPGMFSWEIRDKLLKDGICDRNNIPSVSSISRIMRCKFGGVGGEDEEDDDEIQKRE
LEENERRAKHSIDGILGDRSSHSDEGSDVDSEPGLPLKRKQRRSRTTFSAEQLEELERAF
ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSA
MSSLQPYQLSDSPYPPTSISQTVSEQHSTVHRPQPLPPTSVHQGGLGSSVGTQDGSSAYC
LSSGRHGFSGYSDSFVPPPGHSNPVNPSISNGLSPQVMGLLNPGGVPHQPSHQSDFALSP
LTGGMEPGGGMAASCHGSQRGLEGLPGLTSMPTLPNSQSYCPPTYSSPAYAMDHHPSYQY
GQYGQSKVPFII
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgacagcactagcggggggcataccgaggatgatgcgcccgaacccacaccaaaactac
ccgcggggaggctactctcttgaagtctctaccccgttaggccagggccgggtgaaccag
ctcggtgggatgtttatcaacggcagacccctgcccaaccacatccgccacaagatcgtg
gagatggcccaccacggcatccgaccctgtgtcatctcccgccagctccgagtctcccat
ggatgcgtgtccaaaatcttgtgccggtaccaggagacaggctccatcaggcccgggtcc
atcggaggcagcaaacccaagcagacaacaaccccagatgtggacaagaagatcgaggaa
tacaagagagacaacccgggcatgttcagctgggaaatcagggataaattactcaaagac
gggatctgcgacagaaacaacatcccctcagtgagttcaatcagccgtatcatgcgttgt
aaattcgggggagttggaggagaagatgaggaggacgatgatgaaatccagaagagggaa
ttggaagagaacgaaagacgagcgaaacacagcatcgacggcatcctcggggatagatcc
agccactcagacgagggttcagacgtggactcggagccgggcctgccactgaagaggaaa
cagcgtcgcagtaggaccaccttctcagccgagcagctggaggagctggagagagccttt
gaacgaacacactaccctgatatatacaccagagaagagctagctcagagggccaaactc
acagaagccagagttcaggtatggttcagcaacaggagagccaggtggaggaaacaggca
ggagccaatcagctaatggcatttaatcacctgatccctggcggtttcccaccttcggcc
atgtcgagcttgcagccatatcagctgtcagacagcccctaccctcccacctccatctca
caaacagtgtcagagcagcacagtacagtccacaggcctcagcctctcccccccacctcg
gtgcaccagggtgggcttggctcctcagtggggacccaggacgggagttcggcctactgc
ctgtcctccggacgccacggcttctcaggctactcagacagctttgtgcccccccctggc
cactccaacccagtcaaccccagcattagcaacggcctctcaccacaggtgatggggctg
ttgaacccaggaggagtgccccaccagcctagccaccagagtgacttcgccctctctccc
ctgaccggtgggatggagcccgggggtggcatggcggccagctgccacggctcccagcgg
ggcctggagggtctgccaggcctgaccagcatgcccaccctgcccaactcccagtcctac
tgcccgcccacctacagttccccagcctacgctatggaccaccacccctcataccagtat
ggacagtatggacagagcaaggtgcctttcattatctga
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