Salvelinus namaycush (lake trout): 120055750
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Entry
120055750 CDS
T07522
Name
(RefSeq) parafibromin-like
KO
K15175
parafibromin
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120055750
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
120055750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC73_N
CDC73_C
PemK_toxin
Motif
Other DBs
NCBI-GeneID:
120055750
NCBI-ProteinID:
XP_038859620
UniProt:
A0A8U1EPY4
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Position
Sna11:7623250..7692773
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AA seq
530 aa
AA seq
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MADVLSVLRLYNIQKKEIVAKGDEVIFGEFSWPKNVKTNYVIWGTGKEGQPKEYYTLDSI
LFLLNNVHLPHPSYVRRAATENIPVVRRPDRKGLLSYLNGESSTSTSIDRSAPIEIGLQR
PTQVKRAADEVSSEAKKPRIEDEERVRLDKERLAARLEGHKEGIVQTDQIRSLSEAMSVE
KIAAIKAKIMAKKRSTIKTDLDEDITLKQRSFVDAEVDVTRDIVSRERVWRTRTTILQST
GKNFSKNIFAILQSVKAREEGRAPEQRPAQNTTLVDQSIRTKQPVPAAYNRYDQERFKGK
EETEGFKIDTMGTYHGMTLKSVTEGASARKAQTPALQPVPRPVSQARPPPNQKKGSRTPI
VIIPAATTSLITMLNAKDLLQDLKFVTPEEKKKQGIQRDNEVLLQRRKDQIQPGGATLSV
TVPYRVIDQPLKLAPQDWDRVVAVFVQGPAWQFKGWPWLLPDGSPVDIFAKIRAFHLKYD
EQKMDPNVQKWDVTVLELSHHKRHLDRPMFLKFWETLDRYMVKHKSHLRF
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtattgagtgttcttcgcctgtacaacatccagaaaaaagaaatcgtcgcc
aaaggagacgaagttatctttggagagttctcttggccaaaaaatgtcaagactaactat
gtcatttggggaactggaaaggagggtcagccgaaggagtactatactctggactccatc
ctgttcctgctcaacaatgtgcatctccctcatccatcctatgtgcgaagggctgcaacc
gagaacattccagttgtcagaagacctgatcgaaagggcttgctttcgtatctcaatgga
gaaagttctacttcaacaagtatcgacagaagtgcccccatagagattggtttgcaaagg
ccaacacaagtcaaacgagcagcagatgaggtgtcatctgaagccaaaaaaccaaggata
gaggatgaggaacgggtgcgtctggacaaggagcgtttggctgctagactggagggccac
aaagagggcattgtgcaaactgaccagatcaggtcactttccgaggctatgtcagtggag
aagatcgccgccatcaaagccaagatcatggcaaagaagcgctccaccattaagacagac
ctggatgaggacatcaccctgaagcagaggagctttgtggatgctgaggtggacgtgacc
agggacattgtcagcagggagcgggtgtggaggaccaggaccaccatcctacagagcact
ggaaagaacttctccaaaaacatctttgccatcctgcaatcggtgaaggccagggaggag
ggacgcgcccctgagcagaggccagcacagaacaccactctggtggaccagtccataagg
accaagcaacctgtcccagctgcctataaccgatacgatcaggagagattcaaaggaaaa
gaggaaacggagggattcaagattgacaccatgggcacctaccacggcatgaccctgaaa
tctgtaacggagggagcgtctgccaggaaggcccagacaccagccctgcagcccgtcccc
agaccagtttcccaagccagacccccaccaaatcaaaagaagggctctcggacccccatc
gtcatcatcccagcggccaccacatccctcatcaccatgctcaatgcaaaggacctactg
caggacctcaagtttgtgacgccagaggagaagaagaagcagggcatccagcgggacaac
gaggtgctgctccagagacgcaaggaccagatccagcccgggggtgccacgctcagcgtc
accgtgccctacagggtgatcgaccagcccctcaaactagctccgcaggactgggatcgc
gtggtggccgttttcgtgcaaggtcctgcctggcagttcaagggctggccttggctgcta
cctgacggatctcctgtggacattttcgctaaaatccgagccttccatctgaagtatgac
gagcagaagatggaccccaatgtgcagaagtgggacgtgaccgtgctggagctgagccac
cacaagcgccatctcgaccggcccatgttcctgaagttctgggagaccctcgacagatac
atggtgaaacacaagtcgcacctgaggttctga
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