Salvelinus namaycush (lake trout): 120055780
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Entry
120055780 CDS
T07522
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120055780 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120055780 (rpap2)
Enzymes [BR:
snh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
120055780 (rpap2)
Protein phosphatases and associated proteins [BR:
snh01009
]
HAD phosphatases
Fcp/Scp phosphatases
120055780 (rpap2)
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120055780 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
120055780
NCBI-ProteinID:
XP_038859661
UniProt:
A0A8U1BS92
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Position
Sna11:9492676..9504871
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AA seq
678 aa
AA seq
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MENEPRKRVARSSKPGKRDGKSVKEAQAAAEEARRREAVRETLREKLDLEKRALQVVERL
LEDSVADDFLVDCARLITAANYKDTVEERSIVKLCGYPVCSNKLGKVSTQQFKISTKTNK
VYDITERKSFCSNFCYKASKSFELQISKSPLWLRQHESPPDVKLMKKGDGGSTGEEVRLA
ERRLREDDVENPLPLDFVSPEAPEDPRRSPTAGHSDDSDAEHDFVSSVVSQRRGPRVHWG
DLPKRTAEGQGREPGEGEDKERRSGGKDTTVPKQIQTNEAEDKEEENTEESQKAQRKPSN
GTDGHQQHTTDTNHQSEQQSFLGERGSPEGQSMEEAAELLSQVTIQDRNPATATSPALTA
CSVQNQDPAPNRSPQGAPAQPTQPGINITQVGMSRRGAQGLRGLLKCHEAGTKPVSVRLN
LLEGLRRTFTEWMTEETMKFLYGPDHFSKTLIETKEEKEKEKEEELDEDDLEDIVKDGGE
ERETDSQGGPGRPSAPAPDYDTLRRETEEMGLRVREFYKGTKEVQRVSGKQHARDEDSEN
QGGALPLVDSHSQHLIQKRITVEKLTKGLRDIVGPLRLTMTDVSSDLNRLVRTFRFTNTN
IIHKGPEWTLIAVVLLHLLSEVSPVVREALERPASVDYLSTLMQELPLLDQDLQSLVQLL
RTAELCPHEHTEKRQTNQ
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgagccacgaaaaagagtcgctcgctcttcaaaaccaggcaaaagggatggg
aagagtgtcaaagaagcacaggccgcagcagaggaagcaagaaggagagaggcagtgagg
gagaccctgagagagaagctggatctggagaagagggctctgcaggtggtggagcgtctc
ttggaggacagcgtagcagacgacttcctggttgactgtgcaaggttgatcactgctgcc
aattacaaagacacagttgaggagaggtccattgtgaagctgtgcggttatcctgtctgt
tcaaacaaactgggcaaggtctccactcaacagttcaaaatttccaccaaaaccaataaa
gtctatgacatcacggaacgcaagagcttctgcagtaacttctgctacaaagcctccaag
tcctttgagctgcagatatcaaagagccctctgtggctgaggcagcacgagagcccccca
gatgtgaaattaatgaagaaaggagatggcggtagcaccggagaggaggtgaggctggct
gagaggcgtctcagagaggacgatgtggagaacccccttcccttggacttcgtgtccccc
gaggccccagaggaccccaggcgctcccctacagccggccacagcgacgacagcgatgca
gaacacgactttgtctcaagcgtggtctcccagcgacggggacccagggtgcactggggc
gatctgcccaagcgcaccgccgaagggcagggtagggaacctggagagggggaggacaag
gagagaaggtcgggagggaaggacacaacggtgcccaagcaaatacaaacaaacgaggcg
gaagacaaggaggaggagaatacagaagaatcacagaaagcacaaaggaagccaagcaat
ggcacagatggacaccaacagcacaccacagatacgaaccaccagagtgagcagcaatct
ttcctgggagagagaggctcgccagagggccagtctatggaggaagccgcagagctattg
agccaagttacaatacaggatcgaaacccagccacagctacgtctcctgcactaacagcc
tgcagtgtacagaatcaagacccagctccaaaccgcagtccacagggagccccagcacag
cccacccagcctggcatcaacatcacccaggtgggcatgagcagaaggggagcccagggg
ctccgggggctcctcaaatgccacgaagccgggactaaacctgtctcggtccggctgaac
cttctagaaggcctaaggaggaccttcactgaatggatgactgaggagactatgaagttc
ctatatggcccagaccactttagtaaaacactgatagaaacaaaggaggagaaggagaag
gagaaggaagaggagctagatgaagatgacttggaggacattgtgaaggatggtggggag
gaacgtgagactgactcccaagggggtccaggaaggccctcggccccggccccagactac
gacaccctacgcagggagacagaggagatggggttgagggtgagggagttctacaaaggg
acgaaggaagtccagcgggtgtcagggaaacaacatgccagagacgaagactcagagaac
cagggtggggcactcccgttggttgactcccattcccagcacctcatccagaaacggatt
acggtggagaagctcactaaaggcctgagagacatcgtgggccctctgcgtctcaccatg
actgacgtctccagtgacctcaacaggctggtcagaaccttcagatttacaaacaccaac
atcatccacaaaggcccagagtggaccctgattgcggtggtgctcctccatttgttatca
gaggtgtccccggtggtgcgggaggccctggagaggccggcctcagtcgattacctctct
actctgatgcaggagctcccactgctggaccaggacctgcagagcctggtccagctactc
agaaccgcagagctctgtccacacgagcacacagagaaacggcagacaaatcaatga
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