Salvelinus namaycush (lake trout): 120055845
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Entry
120055845 CDS
T07522
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120055845 (chd7)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120055845 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
120055845
NCBI-ProteinID:
XP_038859783
UniProt:
A0A8U1ENC3
LinkDB
All DBs
Position
Sna11:complement(13746463..13833349)
Genome browser
AA seq
3204 aa
AA seq
DB search
MADPGMLSLFGDDANLFSDGLEGLGDCGFPQGQPNPMGQQMPHEHQGYGSLSSNSLHHPS
QAVPGQPKMGHPYDPFAGYEQQQGRMLGNGPVVNGMASPHSRYHNNPQQPGGGHHVYSGA
QGDGRGQPFPDGGAVWGPQAGPGQGRPPFQQQQAATQAPSHQQHGPSGPQGHGHQMGPYM
GRADYATMQAHSGQTQTPPRINHFPQGMGQEPSHYMGHVGLQQNPSMTGPPMRHPAQQQQ
PPQQQPPAQQFLHRPSQEPMASHTPRFPHSPSRQQQVLAGRPHQNMGFNMHGQAAPPGAV
TSSGQYPPYPQYGNLNQGLAGSAGMSPVMSLSSTSNNSNAMGPAQVQRYPNVGGPPQRYT
GPQVHQQPVHPNQITGQPMHPSQPMHPSQAQATPQQQPHLPTPPQGSYGSPPSMSPMRGM
GTPGGTPPPQQGRPPSAGLAPEVGGYPGVPLQPPNPMAPPQRNPTPMGAQQPHPHLQHHT
QHPSHPQQHPHMPPGQQLYPGMPPNQRVPLGQVRPPGPMAHGEPPGPQDQRLLPLQQQAP
RPGQQLQPPPMAFQQLQQVHPAQAALPPSQAQTHLAGPHHQNSPPNQPPWAPPPHQSPPT
PQKVPHIQHSPSDPSSATTASDRTSASGANLQPAYRDQQPTDTEQKPKKKKKKKKANVIE
GEKGEEGEKGEEGKKQKKKKKKKGVMEEGDEERKPGVGDSCGVEVDPLTGALEESPAADK
KTKKKPKEKEPKEPKPPKTPKMPKTPKDPKEKKARSTTPKAKIPKKHSSTKKVEAVEGGG
SSVKETKRKREPSVSVNSDVEKSPPPPSDEEDDDGVQKRRSSRQVKRKRYTEELEFRISD
EDHDGDSPAPKSPSNNSEQQEVVETEGPVVEKIMAMRMGKKEMESGEEMEVEEFYVKFKS
FSYLHCRWADLEELEKDKRIHQKVKRFRAKQALATFVTEMDDEPFNPDYVEVDRVLDESE
STDENGEPVNLYLVKWCSLPYEDSTWELKADIDLAKIEEYEAVAARQPETKRVERPPTDG
WQKSESSRDYKNDNALREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYL
KGIHGPFLVIAPLSTIPNWEREFRTWTELNVIVYHGSQASRKTIQAYEMNYRDAQSRVIK
GAYKFHAVITTFEMILTDCPELRSVPWRCVVIDEAHRLKNRNCKLLEGLKMMDMEHKVLL
TGTPLQNTVEELFSLLNFLEPERFPSENTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKE
DVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGGPGGGGGAWGGGGAQVPNLL
NTMMELRKCCNHPYLINGAEEKILEDFRENHHAEMAQFHLQAMIQAAGKLVLIDKLLPKL
KAGGHRVLVFSQMVRCLDILEDYLIQKRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVF
LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYER
EMFDKASLKLGLDKAVLQSMSGRENAANGVQQLSKKEVEDLLRKGAYGALMDEEDEGSKF
CEEDIDQILQRRTQTITIESEGKGSTFAKASFVAAGNRTDISLEDPDFWQKWAKKAELDM
DAINGRNTLVIDTPRVRKQTRHYSSMKEDELAEFSELESDGENEKPLTKPRRPQDRAQGY
PRSECFRVEKNLLVYGWGRWGDILSHGRFKRPLREQDVETICRALLAYCLLHYRGDENIK
SFIWDLITPTEDGQSRTLTNHSGLSTPVPRGRKGKKGKPAPPAPPQLPRAEWLASCNPDL
LLQEDSYKRHLKHHCNKVLLRVRMLYYLRQEVIGDQADRILEGTDSSEMDIWIPQPFHAE
VPADWWDSESDKSLLIGVFKHGYEKYNSVRADPALCFLERVGMPDAKAIAAEQRGADMMA
DGPEGEDEDPEYKPLRMPFKDEMDDFTNSPLDDKEEAMDVESGESKPGENGAGSRGAGRL
YWPAASALTARLRRLITAYQRTHKREQLRQEAMARPDGRRRRRPREQLLSMVTDGGGAYV
HEGGAFMAEGSPYMAKGGAFIPEATALLAEGGAFFKERRQRWTRREEADFYRVVSTFGVI
YDTARQRFDWTQFRAFARLDKKTDESLEKYYFSFVAMCKRVCRMQVKTDTELPDPTLIID
PITEERASRTLYRIELLRRIREQVLPHPLLGERLRLCQPSSDLPEWWDCGRHDRDLLLGA
SKHGVSRTDYHILNDPALGFLEAHRKFTKGGSAGAPQPPRDGAPSTASEQAAAEKPSHVK
EEEEEEEGKVVKEEGDNDLPCTKAEKQDEQEGKDEEMEGEKEEKAASPKKELKEEKAKEE
GEDLKDEEDQELKEEKMEVNGDADGETSKEAEPEKEDPPNEDVGDQDKNPEFQEKPESSK
ASEDQETKKEKDGSPAKSPKSPNPVAEKGPEEEDEEKMEEDDKSEKSSQAEVGATSEQKN
FDEESNASLSTTARDETRDGFCPEDGEPSAIQRTFSFSFWPKDRVMINRMDNICEAVIKG
KWPANRRQFFDIPGLLPGYPGPMASESPQQRRGLAELSMVVAAQTSFSGSEDLTLSPQVN
EDALSMSLPKQRRRRRRKVEIEAERAAKRRNLMDMVAQLRESHQPESQSQAMDLTKGMHH
HKAASSLAGYSSSSMVPSATLKAQMELLQAATPSRHRANGSLADADLPTRRRRGRRKNVE
GLELLFINNKRGATEDSEGTKASVEGVQMPPRSYRHNIPSPSASARVPSVSAIEDGDAGT
PSDKDLRDWLRQHPTYTMDMPTAYTPKSEELLLSSQFPKPKQKRHRCRNPNKIDINTLTG
EERVPVVNRRNGRKMGGAMAPPMKELPRWLLENPEFAIAPDWTDIVKQSGFLPEAMFDRL
LTGPVVREEGVRRRGRRPKSEIAKATAAAAAAQAQAASSGGLNPLLMNGLFGGMDLTSLQ
GLQSFQSLQLQLMGFPGMGGADSKHASAMLPLMLPGMAGMGGLPNMFGLGGLFGNNLAAA
SAAATPAAASNGTNDEGDSDETSKRDDGEGGEEGDEEKDTGVESSEANRDAVALNAAAAA
MAASGMSASSLAFNPFLLSTMAPGLFSPYMFLPPGLGGLTMPGFPPTTLADLQSAMAGAM
GAASGAQGQEKEPSQAGPAPDRPAAATADPETADDSDSAESLEKTAESSALEDEASALAE
EADSPQDLAAEDEEEGEDAPEKSD
NT seq
9615 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccagggatgttgagcctgttcggggacgacgccaacctgttctcggacggg
ctggagggcctgggggactgtggcttcccccagggccagcccaaccccatggggcagcag
atgccccacgagcaccagggctacggttcgctctcctccaactccctccaccacccctcg
caggccgttcccggacagcccaagatgggccacccctacgaccccttcgcgggctacgag
cagcagcagggccggatgttgggcaacgggcccgtcgtcaacggcatggcgtccccacat
tcgcgctaccacaacaatccccaacaacctggaggggggcaccacgtctattctggagcg
cagggtgacgggcgcggccagccattccctgacggaggagccgtgtggggcccccaggct
ggccccgggcagggaaggcctccattccagcagcaacaggctgcaacccaggccccctcc
caccaacaacacggcccctcaggaccccagggccacggccaccagatgggcccctacatg
ggccgggccgactatgcgaccatgcaggcccactctggccagactcagacgcctcctagg
atcaaccacttcccccaaggtatgggccaggagcccagccactacatgggccacgtgggg
ctccagcagaaccccagcatgacaggtccccccatgcgccacccagcccagcaacagcag
cctccacagcagcaaccgcctgcccagcagttcctccaccggcccagccaggaacccatg
gcctcccacacccctcgcttcccccacagcccctctcgccagcagcaggtcctggccggg
aggccccaccagaacatggggttcaacatgcacggccaggcagccccccctggtgctgta
accagctcagggcaataccccccctacccccagtacggcaaccttaatcagggattagcc
ggcagtgcagggatgagtcccgtcatgagcctcagcagcaccagcaacaacagtaacgcc
atggggccagcccaggtccagcgctaccccaatgtaggtggacccccacagcgctacacg
ggcccccaggtacaccagcagcctgtccaccccaaccaaatcaccggacagcctatgcac
ccttcccagcccatgcacccctcccaggcacaggccaccccccaacagcagccccacctc
cccacaccgcctcagggatcttacggctctcccccctccatgtccccaatgaggggcatg
ggaacccctgggggcacacctccgcctcaacagggccgcccccctagtgccggcctggct
ccagaggtagggggctacccaggagtcccactccagccccctaaccccatggcccccccc
cagagaaaccccactcccatgggtgctcagcagccacacccccacctgcaacaccacact
cagcacccttcccacccgcagcagcacccccacatgcccccgggccagcagctctacccc
ggcatgccccctaaccagcgagtcccactcggccaggtgagacctccaggtcccatggcc
cacggtgagcctccaggaccccaggaccagcggctgctccctctccagcaacaggctccc
agacctgggcagcagctgcagcctcctcccatggccttccagcagctgcagcaggtgcac
cccgcccaggctgctttgcccccgtcgcaggcccagacgcacctggccggcccccaccac
cagaactctccacccaaccagccaccctgggcgccaccgccacaccagtcgcctccaacc
ccccagaaagtgcctcacattcagcattccccttcagatccatcatccgcgacgacagct
tccgacaggacatccgcctcaggggcaaacctccagccagcctaccgtgaccagcagccc
acggacacagagcagaagccaaaaaagaagaagaagaagaagaaagccaacgtgattgag
ggggagaagggagaagagggggagaagggagaagaggggaagaagcagaagaagaagaag
aagaagaaaggagttatggaggaaggtgacgaggagaggaagccgggcgtcggggacagc
tgcggggttgaggttgaccctctgacaggcgccctggaggaatcgccagcggcggataag
aagaccaagaagaaaccaaaggagaaggagcctaaagaacccaagccacccaagactccg
aaaatgcccaagacccccaaagatcccaaggagaagaaggccaggagcaccacccctaag
gccaagattcccaagaagcacagcagcactaagaaggtggaggcagtggagggcggtggc
agcagtgtgaaggagaccaagaggaagagagaaccgtcagtgtcggtcaactccgatgtg
gagaagtcacccccacctccctctgatgaggaggacgacgacggtgtccagaagcgtcgc
tccagtcgtcaggtgaagagaaagcgctacaccgaggaactggaattcaggatctcggat
gaggaccatgatggagactccccagctcccaagtccccctccaacaactctgaacagcag
gaggtggtggagacagaggggcctgtggtggagaagatcatggccatgcgcatggggaag
aaagagatggaatcgggagaggaaatggaagtggaagaattctatgtgaagttcaagagt
ttctcctacctgcactgtcgctgggcagatctggaggagctggagaaggacaaaaggatc
caccagaaggtcaagcggttcagggccaagcaggccctcgccaccttcgtgacagagatg
gatgacgagcctttcaacccggactatgttgaggtggaccgggtcctggacgagtcagag
agcacagatgagaacggcgagcctgtcaacctgtacctggtgaagtggtgctccctgccc
tatgaggacagcacgtgggagctgaaggccgacatcgacctggccaagatcgaggagtac
gaggccgtggcggcccgccagcccgagaccaagcgcgtggagcgacctcccaccgacggc
tggcagaaatccgagagttccagggattataaaaacgacaacgcactcagggaataccag
ctggagggagtgaactggctgctcttcaactggtacaatacacggaactgcatcctagca
gatgaaatgggcctgggcaagaccatccagtcaatcacattcctctatgagatctacctg
aaggggatccacgggcccttcctggtcatcgcccccctctccaccattccaaactgggag
agggagttccgcacctggaccgaactcaacgtgatcgtctaccatggcagccaggccagc
cgcaagaccatccaggcctacgaaatgaactaccgtgacgcgcagagtcgtgtgataaag
ggagcgtacaaattccatgcggtcatcaccacgtttgagatgatcctgacggactgcccg
gagctgcgcagcgtcccgtggcgctgtgtggtcatcgacgaggctcaccgcctcaaaaac
aggaactgcaaactgctcgagggactcaagatgatggacatggagcacaaggtgctgctg
accggaacgcccttgcagaacactgtggaggagctcttcagtctgctcaacttcctggag
cctgaacgcttcccctcagagaacaccttcatgcaggagtttggcgacctcaagactgag
gagcaggtccagaagctgcaggccatcctgaagcccatgatgctgcgtcgtctcaaggag
gatgtggagaagaacctggcacccaaggaggagaccatcatcgaggtggagctgaccaac
atccagaagaagtactaccgggccatcctggagaagaacttctcctttctgtctaaagga
ggaccgggaggaggtggtggtgcatggggaggcggaggggctcaggtccccaacctgctc
aacaccatgatggagctgaggaagtgctgcaaccacccctacctcatcaacggtgcagag
gagaagatcctggaggacttccgcgagaaccaccacgccgagatggcacagttccacctg
caggccatgatccaggcggcgggcaagctggtgctgatcgacaagctgctgcccaagctg
aaggccgggggacacagggtcctcgtcttctcccagatggtgcgctgcctggacatcctg
gaggactacctcatccagaaacggtacccgtacgagcgtatcgacggccgcgtgaggggt
aacctccggcaggctgcgatcgaccgcttctctcgaccggactctgaccgctttgtcttc
ctgctgtgtacccgggccggaggcctgggcatcaacctgactgctgcagacacctgcatc
atctttgactcggactggaacccccagaatgacttacaggcccaagccagatgccacagg
attggccagagtaaggcagtgaagatctatagactgatcaccaggaactcctatgagaga
gagatgtttgacaaggccagcctcaagctgggccttgacaaggctgtgctgcaatccatg
agtggccgagagaacgcagccaatggggtgcagcagctgtcgaagaaggaagtggaggac
ctcctccgcaaaggagcttacggagctctgatggacgaggaggacgagggctcgaagttt
tgcgaggaagacattgaccagatcctccagagacgaacccagaccatcaccattgagtcc
gagggcaaggggtccaccttcgccaaggcgagcttcgtggccgctggtaacaggacggac
atttccctggaggacccggacttctggcagaagtgggccaagaaggcggagctcgacatg
gatgccatcaatggacggaacaccctggtaattgacactccgagggtacggaagcagaca
cgccactacagctcaatgaaggaggacgagttggcggagttctccgagctggagagcgac
ggcgagaacgagaagcccttgaccaaacccaggcggccacaggaccgagcccaagggtac
ccccgcagcgagtgctttagggtggagaagaaccttctggtttatgggtggggtcgctgg
ggagacatcctgtcccacgggcgtttcaagcggcccctgcgggagcaagacgtggagacc
atctgccgcgccctgctggcctactgcctgctgcactaccgtggcgacgagaacatcaag
agcttcatctgggacctcatcacgcccaccgaggacggacagagccgcacgctcaccaac
cattccggtctgtctactccagtaccacggggtcgtaaggggaagaaggggaaaccagcc
ccgcctgcccctccccagctccccagggcagagtggctggccagctgtaaccctgacctg
ctactgcaggaggacagctacaagagacacctcaaacaccactgtaataaagttctcctg
agggtccgtatgctctactatctgcgacaggaagtcatcggtgaccaagccgaccggatc
ctagagggaacagactcaagtgaaatggatatctggatccctcagcctttccacgccgag
gtccctgccgattggtgggacagcgagtcggacaaatcgctcctcatcggcgtcttcaaa
cacggctatgagaagtataactcggtgcgcgccgaccctgcgctgtgtttcttggagcgg
gtgggcatgcctgatgccaaggccatcgctgcagagcagaggggggcggacatgatggca
gatggtccggagggagaggatgaggacccagagtacaagcctctccgcatgccctttaaa
gatgagatggatgacttcactaactctccccttgatgacaaagaggaagctatggacgtt
gagagtggtgaatctaaaccaggtgagaatggagcaggcagcagaggggcgggtcgtctg
tactggccggcagcctcggccctcaccgctagactccgccgcctcatcactgcctaccag
cgcacgcacaaacgagagcagctccgccaggaggccatggcccggcccgacggccgccgt
cgccggcggccccgagaacagctactctccatggtcacagatggtggaggggcctacgtg
catgagggcggagccttcatggcagagggcagtccttatatggccaagggcggagcgttc
attcctgaggcgacggctctcctggcggaaggaggggccttcttcaaagagaggcgtcaa
aggtggaccaggcgtgaggaagccgacttttaccgcgtggtgtccacgtttggcgtgatc
tatgacacggcccgtcagcgctttgactggacccagttcagggccttcgcccgtctggac
aagaagactgacgagagcctggagaagtactacttctccttcgtggccatgtgcaaacgg
gtgtgtcgcatgcaggtcaagaccgacacagagctcccagaccccaccctgatcattgac
cccatcacggaggagcgcgcatcacgcaccctttaccgcatcgagctgctgcgccgcatc
cgcgagcaggtgttgccccaccccctgctgggcgagcgcctgcgcctctgccagcccagc
tctgacctgccggagtggtgggactgcggcaggcacgaccgcgacctcctcctgggcgcc
tccaagcacggcgtgagccgcaccgactaccacatcctcaacgacccagccttgggcttc
cttgaggcccacaggaagttcaccaaggggggatcggctggggcgcctcagccgccccgc
gatggtgctccctctactgcctctgagcaggccgctgctgagaaaccctcccatgtcaaa
gaggaggaggaggaggaggaaggcaaggtggtgaaagaggaaggtgacaacgaccttcca
tgtactaaagccgagaaacaagacgagcaggaaggcaaggacgaagagatggagggagag
aaagaagagaaggctgcgtctcccaagaaggagttgaaggaagagaaagcgaaggaagag
ggagaggacctaaaagacgaggaagaccaagaactgaaggaggagaaaatggaggtcaac
ggggatgctgacggagagacttccaaggaggccgaacctgagaaagaagaccctcccaat
gaggacgtcggggatcaggacaagaatccggaattccaggagaaaccggagtcttccaaa
gcatcggaagaccaggaaaccaagaaggagaaagatgggagtccagccaagtctcccaaa
tctcccaatccagtggctgagaaaggccccgaagaggaggatgaggagaagatggaggaa
gacgacaagtctgagaagtcgtctcaagctgaagttggtgccacctctgagcagaagaac
tttgacgaggagagcaatgcctcactgagcaccacggccagagacgagacccgcgatggg
ttctgccccgaggatggagaaccctcagccatccagagaaccttctccttctctttctgg
ccaaaggatcgcgtgatgatcaatcgcatggacaacatctgcgaggcggtcatcaagggc
aagtggcccgccaaccgccgtcagttcttcgacatcccgggcctgttgcctggataccct
ggccccatggcgtcagaaagcccccagcagaggcgcggcctggccgagctgtcgatggtg
gtggctgctcagacgagcttcagcggcagcgaggacctcaccctctcgccacaggttaac
gaggatgctctgagcatgtcgttgccaaagcagcgtcgtcgcaggcggagaaaggtggag
attgaggcggagcgcgccgccaagcgaaggaacctgatggatatggtggctcagctcaga
gagtctcaccaacctgagtcccagagccaggccatggacctcaccaagggcatgcatcac
cacaaggcagcgtcgtccctggcgggctactccagcagcagcatggtgccttctgctacc
ctcaaggctcagatggagctgctacaggcggccacgccttccagacatagggccaatggc
tcattggccgatgctgacctgcccacccggaggagacgaggccgcaggaaaaatgtggag
gggctagagctgctgtttatcaacaacaagagaggagccacggaggattccgaggggacc
aaagcgtcggtggagggggtgcagatgcccccacgttcctaccgccacaacattcccagt
cccagcgcatctgcccgcgtcccctctgtcagcgctatagaggacggggacgctggtacc
ccctctgacaaggacctgagggactggctcagacagcaccccacgtacacaatggacatg
cctactgcatacacaccaaagagtgaggagttgctcctctcctcccagttccccaaaccc
aagcagaagcggcaccgctgccgaaaccccaacaagatcgacatcaacactctcactgga
gaagagagggttcccgtggtcaaccggagaaacggcagaaagatgggtggagccatggcg
ccgcccatgaaggaactgccccgatggctcctggagaacccagagtttgccatcgctcct
gactggaccgacattgtcaagcaatcgggcttcctccctgaggccatgtttgaccgtctc
ctgacggggcccgtggtgcgcgaggagggcgtccgtcgtcgggggagacgccccaaatcg
gagatcgccaaggcgacggcagctgccgcggcagctcaggcccaggctgcatcgtccggg
ggcctgaaccctctgctgatgaatggtctgtttggaggcatggacctcaccagcctgcag
ggcctacagagcttccagagtcttcagctgcagctcatgggcttccccggcatggggggg
gctgactctaaacacgcctcagccatgctgcctctcatgctgcctggtatggctggtatg
ggcggcctgccaaacatgtttggcctgggaggcctgttcggaaataacctcgccgctgcc
tcggctgcagccacgcccgctgcagcctccaacggcaccaatgacgagggcgattcggac
gagacgtcaaagagagacgacggggagggcggagaagagggggatgaggagaaggacact
ggggtggagtcgagcgaggctaacagggacgccgtggctctgaacgcagccgctgccgca
atggccgcctccggcatgtcggccagctccctggccttcaaccctttcctgctgtccacc
atggcccctgggctcttttccccctacatgttcctgccccctggcctgggaggtctcact
atgcctggcttcccccccaccaccctggctgacctgcagagcgccatggctggagccatg
ggggctgcttctggagctcagggccaggagaaggagcccagccaggctggccctgccccg
gaccgccctgccgccgctaccgcagacccagagacagccgacgacagtgactcagcagag
agcctggagaagacggccgagtcgtctgccctagaagacgaggcctccgcattggctgag
gaagccgactcgccgcaagacctagcagccgaggatgaggaggaaggagaggatgcccct
gagaagagtgactga
DBGET
integrated database retrieval system
