Salvelinus namaycush (lake trout): 120055860
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Entry
120055860 CDS
T07522
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3-like
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00061
Fatty acid biosynthesis
snh00071
Fatty acid degradation
snh01100
Metabolic pathways
snh01212
Fatty acid metabolism
snh03320
PPAR signaling pathway
snh04146
Peroxisome
snh04216
Ferroptosis
snh04920
Adipocytokine signaling pathway
Module
snh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120055860
00071 Fatty acid degradation
120055860
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120055860
09143 Cell growth and death
04216 Ferroptosis
120055860
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
120055860
03320 PPAR signaling pathway
120055860
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
snh01004
]
120055860
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120055860
Enzymes [BR:
snh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
120055860
Lipid biosynthesis proteins [BR:
snh01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
120055860
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of breast milk
120055860
Exosomal proteins of breast cancer cells
120055860
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
120055860
NCBI-ProteinID:
XP_038859809
UniProt:
A0A8U1EIP8
LinkDB
All DBs
Position
Sna11:15793618..15819116
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AA seq
715 aa
AA seq
DB search
MKLKEDMNPLLLQVFRSVVWVYSVITFLPWYLLSGAGANLDRARRVKARSVSGRPAGPYR
ATNHKDGSQQKLVSSLHPGVDTLDKVMEHGAARFPERNCLGTREVLSEEDELQPNGKVFK
KVILGEYQWMSYEETYQAAVCFGSGLAALGQRPQCNIAIFCETRAEWMIAAQACFIYNFP
LVTLYSTLGGAAIAHGLNETEITHIITSKDLLHSRLKDILLEVPRLQHIIVVDSKPTSWP
GFPRGIMVHNMDAVQELGSRPDNMAVARRRPLPSDIAVIMYTSGSTGIPKGVMISHSNII
AGVTGMAERIPDLDETDTYIGYLPLAHVLELSAEMVCISHGCCIGYSSPQTLADQSTKIK
KGSKGDTSVLKPTLMAAVPEIMDRIYKNVMTKVEEMSSVQRTLFVLAYNYKMEQITKGYK
TPLCDSLVFRKVRSLLGGHMRVLLSGGAPLSAATQRFMNICLCCPVGQGYGLTETCGAGT
ISEMWDYRTGRVGAPLICSEITLKDWEEGGYYSTDKPHPRGEIVIGGPNVTMGYYKNEVK
NREDFFVDSNGQRWFCTGDIGEFHPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAMLKNCP
FVDNICAYANSDQSYVIGFVVPNQKHLMALAEQRGLRGSWEEICNNPDMERDVLHVITEA
ALSAKLERFEIPRKIRLSAEPWTPETGLVTDAFKLKRKELKSHYQEDIERMYGGK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaaagaggacatgaacccactgctgctgcaggtcttccgctcggttgtctgg
gtgtactctgtcatcaccttcctgccctggtacctgctctcgggcgctggagccaaccta
gaccgggcgcggcgggtcaaggcacggtcagtgagcggtcgcccggcgggcccttaccgg
gcgaccaaccataaggatggtagccagcagaagctggtgtcttccttgcacccaggagtg
gacaccctggacaaggtgatggagcatggagcagccaggttcccagagaggaactgcctg
ggcacgagagaggtgctgagcgaggaggacgagctccaacccaacgggaaggtcttcaag
aaggtgatcctgggggagtatcagtggatgtcgtatgaggagacctaccaggcagcagtg
tgttttggcagtgggctggccgcgctgggccagaggcctcagtgtaacatcgccatcttc
tgtgagaccagggccgagtggatgatagcagcacaggcctgcttcatatacaacttccca
ttggtgacgttgtactccactctgggcggagcggccattgcccacggtctgaacgagact
gagatcacccacatcatcaccagcaaagacctgctacacagccgtctcaaggacattctg
ttggaggtgcctcggctgcagcacatcatcgtggtggacagtaagccaaccagttggccc
ggcttcccccgtggcatcatggtccacaacatggacgccgtgcaagagctgggctccaga
cccgacaacatggcggtggcgcgccggcggcccctgccctctgacatcgctgtcatcatg
tacaccagcggctccacgggcatccccaagggcgtcatgatctcccatagcaacatcatc
gcgggcgtcacaggcatggcagagcgcataccagacctggatgagacagacacctatatt
gggtacctgccgctggcccatgttctagagctgagtgcagagatggtgtgtatctctcac
ggatgctgcatcggatactcctccccacagacgctagcagaccagtcgactaagattaag
aagggcagtaaaggagacaccagtgttctaaaacctacactcatggctgctgtaccggag
atcatggatcggatctataagaatgtgatgaccaaggtggaggagatgagcagtgtgcag
agaaccctgtttgtgttggcctacaactataagatggaacagatcaccaagggctacaag
accccgctctgtgacagtctggtgtttaggaaagtgcgctcgttgttggggggtcacatg
agggtgctgttgtcaggcggagcacccctctccgccgccacccagcgcttcatgaacatc
tgcctctgctgtcccgtgggccagggctacggcctcaccgagacctgcggagctggcacc
atcagcgagatgtgggactatcgcacaggtcgggtcggcgctcctctgatctgctccgag
atcaccctcaaggactgggaggagggcggttactacagcacagacaagccacacccgaga
ggggagattgtaatcggcggtcccaacgtgactatgggttactacaagaacgaggtgaag
aaccgcgaggacttcttcgtggacagcaacggccagcgctggttctgtacaggagacatc
ggggagtttcacccagacgggtgcctcaagattatcgaccgtaagaaggatctggtgaag
ctccaggctggggagtatgtgtctctggggaaggtggaggccatgctgaagaactgccct
ttcgtagacaacatctgcgcctacgcaaacagtgaccagtcgtatgtgattggctttgtg
gtgcccaatcagaagcatttgatggcgctggcggagcagagagggttacggggcagctgg
gaggagatctgtaacaaccctgacatggagagagacgttctccacgtcatcacagaggcc
gctctgtcagccaaactggaacgctttgagatccctaggaagatccgtctgagtgcagag
ccctggacaccggagactggcctggtgaccgacgcattcaaactcaaacgcaaggagctc
aaatcacactatcaggaagacatcgagagaatgtacggtggcaagtaa
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