Salvelinus namaycush (lake trout): 120055881
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Entry
120055881 CDS
T07522
Name
(RefSeq) target of EGR1 protein 1-like
KO
K13202
target of EGR1 protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120055881
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120055881
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
120055881
NCBI-ProteinID:
XP_038859842
UniProt:
A0A8U1ESN5
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Position
Sna11:complement(18538543..18542894)
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AA seq
528 aa
AA seq
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MTSSMVVPVIDVQNDNFKELWPVMVLAIKTASFIALDTELSGLGSRKALLAECIEDRYKA
ICNAARTRSILSLGFACFKKLENKDDDTYLVQVYNLTLLCSEEYVIEPQSVQFLVQHGFD
FNKQYAEGVPYLKGNDMGGDSHGINMRMLFVELLRARKPLVLHNGLIDMVFLYQCFYAHL
PDKLGTFTADLSQMFPAGIYDTKYTTEYELRFAASYLEYAYKKCKLDNSKSLEVGGNGHH
LFLEFCKYSGHLSSYVDFRPCLAGSSLEGPLNVCQRFSAYGWCPNGSLCPLSHDTDLIIQ
HDEKNKVEKKKKRKRKRKNSSQGNVDFEGASENKQAHMELKDGEQGPDQVIPDTDSKPPP
VTEQVDGTPAQGSESGEKMMTEKVEEGNGVAEPQAVSADEEMKTDKEKVEGNGVSEPQPL
ATSDAAKKEKSKRKKLEGGSHRAGFDAFMTGYIFSYATTLTERVGEPPCSESWLPECLNK
VYLSGKSVPMHIVKSTFSKSSKAHMHKMDIVWGKSFSSSVASKAEGAV
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgacatcctccatggtagtccctgttattgatgtgcaaaatgataatttcaaagaactg
tggcctgttatggtccttgcaatcaagactgcctccttcattgcactggatacagaattg
agtgggcttggaagcagaaaagctttgctggcagaatgcatagaggaccgttacaaagcc
atatgcaatgcagctcgcacacgctcaattctctcccttgggtttgcttgttttaagaaa
cttgaaaacaaggatgatgatacgtaccttgtccaggtgtacaacctgacgttgctctgc
agtgaggagtatgtaattgaaccacaatctgtgcagttcctggtgcaacatggatttgac
ttcaacaaacaatatgctgaaggtgtcccttatctcaagggcaatgacatgggaggggat
tcccatggaattaacatgcggatgctgtttgtggaactcctgcgtgctcgcaagccattg
gttctacacaatggcttgattgacatggtgttcctgtatcagtgcttctatgcccacctg
ccagataaacttggcactttcactgctgacctgtcccagatgttcccagctgggatatat
gacaccaagtacaccacagagtatgagctgcgctttgctgcctcttacctggagtatgcc
tacaagaaatgtaaattggacaacagcaagtctcttgaggttggtggtaatggacaccat
ctgttcctggagttctgcaaatactcaggccacctgtccagctatgtggacttcaggccc
tgcctggccgggtctagcctggagggaccgctgaatgtctgccagcgtttctctgcttac
ggttggtgccccaatgggtcactgtgtcccttgtcacatgacactgacctcatcatccag
cacgatgaaaaaaacaaggtggaaaagaaaaagaaacggaagaggaaaagaaaaaactct
tctcaggggaacgtggactttgaaggtgcctccgagaataagcaggcccatatggagctg
aaggatggagagcagggcccggaccaggtgatccctgacacagacagcaaacctccccct
gtcacagagcaggtagatgggactccggcacaggggtcagagagcggtgagaaaatgatg
acagagaaggtagaggaaggcaacggagtcgcagagccacaggctgtgtctgcagatgaa
gaaatgaagactgacaaagaaaaggtggaaggtaatggtgtgtcagagccacagcctctg
gccacatctgatgcagcgaagaaagaaaagtccaagaggaagaagctggaaggaggttcc
caccgggcagggttcgatgcattcatgaccggctacatcttctcctatgccaccactctg
acagagagagtaggtgagccaccgtgttcagagtcctggctccctgagtgcctgaacaaa
gtttacctcagtggcaagtctgtcccaatgcatattgtcaagagcaccttctccaagtcc
tccaaggctcacatgcacaagatggacattgtgtgggggaaaagcttttctagcagtgtg
gctagcaaagcagagggagctgtataa
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