Salvelinus namaycush (lake trout): 120055897
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Entry
120055897 CDS
T07522
Name
(RefSeq) cullin-1-like
KO
K03347
cullin 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04110
Cell cycle
snh04114
Oocyte meiosis
snh04120
Ubiquitin mediated proteolysis
snh04141
Protein processing in endoplasmic reticulum
snh04310
Wnt signaling pathway
snh04340
Hedgehog signaling pathway
snh04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120055897
04120 Ubiquitin mediated proteolysis
120055897
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120055897
04340 Hedgehog signaling pathway
120055897
04350 TGF-beta signaling pathway
120055897
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120055897
04114 Oocyte meiosis
120055897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120055897
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
120055897
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Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
IntS11_C
Motif
Other DBs
NCBI-GeneID:
120055897
NCBI-ProteinID:
XP_038859865
UniProt:
A0A8U1C3F0
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Position
Sna11:20296443..20313082
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AA seq
777 aa
AA seq
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MSSNRSQNPHGLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQSN
QARGAGPPPSKPSKKAPTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFY
TQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECLFRPLNKQV
TNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLSVYKEYFETQFLAD
TERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKH
LEIFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLETHIYNQGLAAIEKCGEAA
LNDPKMYVQTILDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMVQSSSKSP
ELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNS
ASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDLDFSIQV
LSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTWLYHLSKGELVTNCFKNRY
TLQASTFQMAILLQYNAEDVYTVQQLADSTQIKIDILVQVLQILLKSKLLVLEDENANVD
EVEFKPDTLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIM
KMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccaacagaagccagaaccctcatgggctcaagcagattggcctggaccagatc
tgggatgacctgcgagcaggaatacagcaggtgtacaccagacagagcatggccaaatca
cgatatatggaactgtacacacatgtttataactactgtaccagtgtgcatcagtccaat
caggcccgtggggcagggccccctccatccaagccctccaaaaaggccccaaccccagga
ggggcccagtttgtgggcctggagctctacaagagactcaaggagttcctcaagaactac
ctgaccaacctcctcaaggatggagaagacctgatggatgagagtgtattgaagttctac
acacagcagtgggaagactacagattctccagcaaagtgctgaatggtatctgtgcctac
ctcaaccggcactgggtccgccgcgagtgtgacgaggggcgcaaagggatatatgaaatc
tactccctcgcgttggtgacatggagagaatgccttttcagacctttgaataaacaagtc
acaaatgctgtattgaagctcattgagaaggaacgtaacggagagaccatcaacactagg
cttatcagtggagtcgtccagtcctatgttgagttgggtctcaatgaggatgatgccttt
gccaaaggccccacgttgtcagtctacaaagagtacttcgagactcagttcttggcggac
accgagcgcttttacacacgagagagcacagagttcctgcaacaaaatccagttactgaa
tacatgaaaaaagctgaggcgcgtctgttggaggagcagcggagggtgcaggtgtacctc
catgagagcacgcaggacgagctggcccgcaagtgtgagcaggtgctcattgagaagcac
ctggagatcttccacacagagttccagaaccttctggacgctgacaaaaatgaagacctt
gggcggatgtacaatttggtgtcccggatcactgatggattgggagagctgaagaaactc
ctggagacgcacatatataaccagggccttgctgctatagagaagtgtggagaagcagct
ctcaatgatcccaaaatgtatgtccagaccatcttagacgtccacaagaagtataatgct
ttagtaatgtcagcgttcaacaacgatgctggttttgttgctgctctggacaaggcctgt
ggacgcttcataaacaacaatgctgtaaccaagatggtgcagtcatccagcaaatcccca
gagctgctggctagatactgtgactctctgctgaagaagagctcaaagaacccagaggag
gcagagctagaagacacactaaaccaagtgatggtggtctttaagtacatagaggacaaa
gatgtgttccagaagttctacgccaagatgctggctaagcggttagtccatcagaacagc
gccagtgatgatgctgaagccagtatgatctccaaactaaagcaagcgtgcggcttcgag
tacacctccaaactccaacgcatgttccaggacatcggagtcagcaaagacctaaatgaa
caatttaaaaagcacctcaccaactctgagcctttggacttggacttcagcatccaggtc
ctcagttctggttcctggcccttccagcagtcctgtacatttgccttgccctctgagctg
gagaggagttaccaaaggttcactgccttctacgccagcagacacagcgggcgcaagctg
acctggctctaccacctgtccaaaggagagctggtcaccaactgctttaagaacagatac
acgctgcaggcttctaccttccagatggccatcctattgcagtacaatgctgaggacgtc
tacacagtgcagcagctcgctgacagcacacagatcaagatagacattttggtgcaggtg
ttgcaaatcttgttgaagtccaaattgctggtcctggaggatgagaatgcaaatgtggat
gaagtggagttcaaaccagacaccttaataaaactcttcctgggatacaaaaacaaaaaa
cttcgggtgaacattaacgtgccaatgaagacagagcagaagcaggagcaggaaaccact
cacaagaacatagaggaggacaggaaactgttaatacaggctgccattgtgagaatcatg
aagatgcgcaaagtgctgaaacatcagcaactcctggcagaggtgctgaatcagctgtca
tccaggttcaaaccaagagtccccgtcatcaagaaatgtatcgacatcctgatagagaag
gagtacctggagcgtgtcgacggagagaaagacacttacagctacttggcttaa
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