Salvelinus namaycush (lake trout): 120055944
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Entry
120055944 CDS
T07522
Name
(RefSeq) protein SSXT-like isoform X1
KO
K15623
protein SSXT
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120055944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120055944
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120055944
GBAF(ncBAF) complex
120055944
SSDB
Ortholog
Paralog
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Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
120055944
NCBI-ProteinID:
XP_038859941
UniProt:
A0A8U1BM75
LinkDB
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Position
11:complement(25224720..25236342)
Genome browser
AA seq
382 aa
AA seq
DB search
MSVAFAPHRQRGKGDITPTGIQKLLDENNQLIQCIMDFQSKGKTAECSQYQQMLHRNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGAPGPQPPHGHNMPSEGMVSGGPPAPH
MQSQMNGQMPGPNHMPMQGPGPGPNQPPNMPGSGSMNMPPSSHGSMGGYNHAVPSSQSMP
AQGQMNMTQGPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNIPPGGGGQHYQGQQNPMGM
MGQGNHVMGQRPMPPYRPPQQGPPQQYPGQEDYYGDQYSHAGQGASEGNAQYGQQQEAYQ
QGPPQQQGYPPQQQYPGQQGYPGPQQGYGPSQGAPGQYPQGYPQGQGQQYGAYRGPQPGP
PQAQQQRPYPGYDQGQYGNYQQ
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgtttgcacctcatagacaacgtggaaagggtgatataacacccactgga
attcaaaagttactggatgaaaacaatcagctgattcaatgtataatggacttccagagc
aaaggaaagacggcagaatgttcacagtaccagcagatgctccacagaaatttagtttac
ctggccacaatagcagactccaatcagaacatgcagtctctgctccctgctcctcctact
cagaacatgcccatgggccctggtgggatgaaccagagcggagcgccgggcccccagccc
ccccacggacacaacatgccctctgagggcatggtcagtggcggacccccagccccacac
atgcagagccagatgaacggacagatgcctgggcctaatcacatgcccatgcagggccct
gggccgggtcccaaccagccccccaacatgcctggcagcggctccatgaacatgcccccc
agcagccatggctctatgggcggctacaaccacgctgtgccctcctctcagagcatgcct
gcccagggccagatgaacatgacccaaggacccatgggtaactacggcccccggcccaac
atgaacatgcagcctaaccaaggccccatgatgcaccagcagcctccctcccagcagtac
aacataccccctggaggtggcgggcagcactaccagggccagcagaaccccatgggcatg
atgggccaggggaaccatgtgatggggcagaggcccatgcccccttacagacccccacag
caaggaccccctcagcagtacccagggcaggaagactactatggggaccagtacagtcac
gcaggacagggagcctcagaaggtaatgcccagtatggccagcagcaggaggcctaccag
caaggtcctccccagcagcagggctaccccccacagcagcagtaccccggacagcaggga
taccctggaccgcaacagggctacggtccgtcccagggagccccaggccagtacccccag
ggttacccccagggtcaggggcagcagtacggggcctaccggggcccccagcccggcccc
cctcaggcccagcagcaacgcccatacccaggctacgatcagggtcaatatggaaattac
cagcaatga
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integrated database retrieval system