Salvelinus namaycush (lake trout): 120055991
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Entry
120055991 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase mib1-like isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120055991
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120055991
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120055991
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
SH3_15
MIB_HERC2
Ank_4
Ank_3
zf-C3HC4_3
Ank_KRIT1
ZZ
zf-C3HC4_2
Sina_RING
Prok-RING_4
zf-RING_5
Acidic_SOMP
Motif
Other DBs
NCBI-GeneID:
120055991
NCBI-ProteinID:
XP_038860025
UniProt:
A0A8U1EQ86
LinkDB
All DBs
Position
11:30052451..30136628
Genome browser
AA seq
1046 aa
AA seq
DB search
MTTGRNNRVMMEGVGARVIRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDVRIFDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECNNYDLCTTCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIFTGGRVVRGVDWQWEDQDGGNGRRGKVTE
IQDWSAASPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGN
RNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPS
GNRWTFNPAVLTKANVVRSGEGVAAGAEGGSSQFLVGDLVQICYDIDRIKLLQRGHGEWA
EAMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVTKVAPTGSAVTNASGERLSQLL
KKLFETQESGDVNEELVKAAANGDLAKVEDILKRPDVDVNGQCAGHTAMQAASQNGHVDV
LKLLLKHNVDLEAEDKDGDRAVHHASFGDEGSVIEVLQRGGADLNARNKRRQTPLHIAVN
KGHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDMLSVLLEAGADVTITNNNGFNA
LHHAALRGNPSAMRVLLAKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGSASL
DIQNVNQQTALHLAVERQHTQIVRLLVRAEAKLDVQDKDGDTPLHEALRHHTLSQLRQLQ
DMQDVSKVEPWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLTMRNKKGQSPLDLC
PDPSLCKALAKCHKEKSSGQVGSRSPSLNSNGETLEECMVCSDMKRDTLFGPCGHIATCS
LCSPRVKKCLICKDQVQSRTKIEECVVCSDKKAAVLFEPCGHMCACENCAGLMKKCVQCR
AVVERRTPFVLCCGGKGMEGDAADDDDDDDDDDDDDDEDLTGNSNSALMAGGSLDLLQPN
NLALSWSSGNIPAMQRDKDNTNVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIFICGHG
TCQLCGDRMSECPICRKAIERRILLY
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgactaccggcaggaataaccgtgtgatgatggaaggagttggtgcaagagtgatccgc
ggacccgattggaaatggggaaaacaggatggtggcgagggacatgtaggcaccgtcagg
agttttgaaagtccggaagaagtggttgttgtctgggataacgggactgcagccaactac
cggtgctctggtgcatacgacgtgaggatatttgatagtgctcccacaggtatcaagcat
gacggcaccatgtgcgacacctgtcgtcagcagcctatcatcgggatccgctggaagtgt
gctgaatgcaacaactatgacctctgcaccacctgttaccatggagacaagcaccacctg
cgacatcgcttctacaggatcactacccctggtagcgagagagtcttgttggagtctcgc
cgtaagtcgaagaagatcacagcccgaggcatcttcaccggtggccgggtggtgagagga
gtggactggcagtgggaggatcaggatggaggcaacggaaggagaggaaaggtgacagag
atccaggactggagtgcagccagcccccacagtgcagcctacgtcctctgggacaatggg
gccaagaacctctacagagtgggcttcgaggggatgtcggatttgaaatgtgtccaggat
gccaaaggaggctctttctacagagaccactgccctgttctaggtgagcagaatggcaac
agaaacccaggcggtttgcagatcggagacctggtcaacatcgacctggacctggaaata
gtccagtccctgcagcacggccacggaggctggacagacggtatgttcgagactctcacc
accaccggtaccgtgtgtggcatcgacgaggaccacgacattgtggtgcagtaccccagt
ggtaacaggtggacgttcaaccctgcggtgctgaccaaggccaacgtggtgcgtagtggg
gaaggtgttgcggcgggggcagagggaggcagctcccagttcctggtgggagacctggtc
cagatctgctacgacatcgaccgcatcaagctgctgcagagaggccatggggagtgggct
gaggccatgctgccaaccctgggcaaggtgggccgcgtgcagcagatctactctgacagc
gacctgaaggtggaggtatgtggaacgtcatggacctataaccctgctgccgtcaccaag
gtggcccccactggctctgctgtcaccaacgcctccggagagcgtttgtctcagctgctg
aagaagctgtttgagacccaggagtcgggtgatgtcaatgaggaactggtcaaagcagca
gccaatggagacctggccaaggtggaggacatcctcaagagacctgacgtggacgtgaac
gggcagtgtgctggacacacagccatgcaggcggccagtcagaacggtcacgtggacgtc
ctcaagctgctgctgaaacacaacgtggacctggaggctgaggacaaggatggagaccgg
gcggtgcaccacgcgtccttcggagacgagggctctgtgatcgaggtgctgcagaggggc
ggtgccgacctgaacgccaggaacaagcgtagacagacccccctgcacattgctgtcaac
aaaggccatctgcaggtggtcaagaccctgctggactttggctgccaccccagcctccag
gactccgagggagacacgcccctgcatgacgccatcagtaagaagagggacgacatgctc
tctgtgctgctggaggcgggagctgacgtcaccatcaccaacaacaacggattcaacgcc
ctgcaccacgccgccctgcgagggaaccccagtgccatgcgtgtgttgctggccaagctg
ccgcggccctggatcgtagatgagaagaaagatgacggttacaccgccctgcacctggcg
gcgctcaacaaccacgtagaggtggccgagctgctggttcaccagggcagtgccagcctg
gacatccagaacgtcaaccagcagacagccctgcacctggctgtggagagacagcacaca
cagatagtcaggctgctggtgcgagcagaggcaaagctggacgtgcaggacaaggatggg
gacactcctctccacgaggcgctgcgtcaccacacgctgtcccagctccgccagctgcag
gacatgcaagacgtcagcaaggtggagccctgggaaccctccaaaaacacgctgatcatg
ggcctgggcacccagggagcagagaagaagagtgcagcgtccatcgcctgcttcctggca
gctaacggagcagacctgaccatgcgcaacaagaagggccagtcccctctggacctctgc
cctgaccccagtctctgtaaggccctggccaagtgccacaaggagaagtccagtggccag
gtgggctctcgcagcccgtctctgaacagtaacggtgagaccctggaggagtgtatggtg
tgttctgacatgaagagagacaccctgttcggaccatgcggacacatcgccacctgctct
ctctgctccccccgcgtcaagaagtgtctcatctgcaaggaccaggtccagtccagaacc
aagatcgaggagtgtgtcgtatgttctgacaagaaggctgccgtgctcttcgagccctgc
ggtcacatgtgcgcttgtgaaaactgtgccggcctcatgaaaaagtgcgtacagtgccgg
gctgttgtggaacgccgcacgccctttgtcctttgttgtggagggaaaggtatggagggt
gatgccgctgatgatgatgatgatgatgatgatgatgatgatgatgatgatgaggacctt
acaggtaactctaactcagctctaatggcagggggctcgctggatctactccagcccaac
aatctggcactaagttggtccagcggtaacatcccggccatgcagagagacaaagacaac
accaatgtcaacgctgacgttcagaaactgcagcagcaactgcaggacatcaaggagcag
accatgtgtccggtgtgcctggaccggctgaagaacatgatcttcatatgtggccacggc
acctgccagctgtgtggcgaccgcatgagcgagtgccccatctgccgcaaggccatcgag
aggcgcatccttctgtactag
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