Salvelinus namaycush (lake trout): 120056016
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Entry
120056016 CDS
T07522
Name
(RefSeq) SURP and G-patch domain-containing protein 1-like
KO
K13096
splicing factor 4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120056016
Spliceosome [BR:
snh03041
]
Complex A
Other components
Complex A specific factors
120056016
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GFIT
Motif
Pfam:
Surp
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
120056016
NCBI-ProteinID:
XP_038860074
UniProt:
A0A8U1C2C6
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Position
Sna11:complement(31578617..31584870)
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AA seq
655 aa
AA seq
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MESGDTGRGGWNNKFRPAQKNRMSVNILRQEELIAQKKREIEAKMAEQAKKKSLQAPNKP
LPPSSQGHSSNNNKYVNDGSFLQQFMKLQKDKPSSDSGSSSDTKAPSSSTPRPSSGVSQP
QMKSILIGKRPGLGISSMLSQFKNYSQSKKTPLLPQRPSIFSSPDEDDDDDDEEVDDSSF
LEIKVFPPEDPDTRLILDKMAAFVAEGGPELERKAKEDYKDNPVFSFLYDNNSQDYLYYR
KRVAELRKDHSKHETPSRSHVSPPVDEETQRVAEKLAMFVADGGPEVEAIAAQHNQENPT
FSFLYDLQSPAHRFYKEKVEEYRQAKNAQSPPPTIKQEPEVELKRPAAPPLTYPPPPPPP
HYPYLVGQVKLEPGLGIKQEVSGTPVVKRKRKSRWGSEDDKVDLSLQPIIIPKEEEQEPS
PCLSVNELRDLGYKKGKPMGLVGVTELSDDQKKQLKEQQEMQEMFDMIMKHKRAMAEMQV
MWEKAVRDHSHEYDSDEEVDQQAGTWEHRLRHMEMEKTREWAESLTDMGKGKHFIGDFLP
PEELEKFMETFKALKEGRNPDYSEYKEFKLTVENLGFQMLMKMGWKEGDGLGSGGQGIKT
PVHRGTTAVDGAGFGVDRPSELSGQDDEYDAFRKRMMLAYRFRPNPLNNPRRPYY
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggagtccggagatacagggagaggaggctggaacaacaagttccggccagcccagaag
aacaggatgagtgtgaacattctccgtcaggaggagctgatcgcccagaagaagcgcgag
atcgaggctaagatggcagagcaagccaagaaaaagagccttcaggctcccaacaagcca
ctaccaccaagttcacagggacactcttcgaacaacaacaagtatgtgaacgacggaagc
ttcttgcagcagtttatgaagcttcagaaggacaaacccagctccgactctggctccagt
agtgacaccaaagccccgtcatcatccacccccaggccgtcgtcaggagtgtctcagccc
cagatgaagagcattctcatcggcaagcgacccggtctagggatcagcagcatgctaagc
cagtttaagaactactcccagtccaagaagaccccgcttctcccccaaagacctagcata
ttcagctccccagatgaagatgatgatgatgatgatgaggaagttgatgactcaagcttc
ctagaaatcaaagtctttcccccagaagacccagacacacgacttatcctggacaagatg
gcggcctttgtggctgagggagggcctgagctagagaggaaggccaaggaggactacaag
gacaaccctgttttctcatttttgtatgataataacagccaggattatctttattaccga
aagagagttgctgaactccgaaaggatcactcaaaacatgagacgccatcacgttctcat
gtctcccccccagtggacgaggagacccagagggtggctgagaagctggccatgtttgtg
gccgatggtggccccgaggtggaagccatcgccgcccagcacaaccaggaaaaccccacc
ttcagttttctatatgacctccaaagccccgcccaccgtttctacaaggagaaggtggag
gagtaccgccaggccaaaaatgcccagagcccccctccaacgattaagcaggagcctgag
gtggagctcaagagaccggccgcccctcccctgacctatcctcccccgcctccgccccct
cactacccctacctggtgggtcaagtaaagctggagccgggtctggggataaaacaggaa
gtgtcaggtacgcccgtggtgaagaggaagaggaagagccgctgggggtcggaggacgac
aaggtggatctgtcactgcaacccatcatcatccccaaggaggaggagcaagagcccagc
ccgtgtctctctgttaatgaactgagggatctgggctataagaagggaaagcctatgggc
ctggtgggagtgactgagctctcagacgaccagaagaaacagctcaaagagcaacaggag
atgcaggagatgtttgacatgatcatgaagcataagcgtgccatggcagagatgcaggtg
atgtgggagaaggcggtgcgggaccactcccacgagtacgatagtgacgaggaggtggac
cagcaggctggcacctgggagcaccgcctccggcacatggagatggagaaaacacgtgag
tgggcagagtcgctgactgacatgggaaaggggaagcacttcattggtgacttcctacct
ccggaggagctggagaagtttatggagaccttcaaggcactcaaggagggccgtaaccca
gactactcggagtataaggagtttaagctgacggtggagaaccttggtttccagatgctc
atgaagatgggctggaaggagggcgatgggcttggctctggcggacagggcatcaagact
ccggtccacaggggaaccacggctgttgacggggcagggtttggcgtggaccggccctct
gagctctcaggacaggacgatgagtatgatgctttcagaaagaggatgatgctggcctac
cgcttcaggcctaacccactgaacaacccgaggaggccatactactga
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