Salvelinus namaycush (lake trout): 120056018
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Entry
120056018 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120056018
04121 Ubiquitin system [BR:
snh04121
]
120056018
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120056018
Membrane trafficking [BR:
snh04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
120056018
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120056018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
Zn_ribbon_19
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-RING_16
zf-Nse
HypA
C1_2
Zn_ribbon_6
Motif
Other DBs
NCBI-GeneID:
120056018
NCBI-ProteinID:
XP_038860075
UniProt:
A0A8U1C3N7
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All DBs
Position
11:31584115..31589279
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AA seq
333 aa
AA seq
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MHFVGCRYPYTFPLGCLVENPKMAEAPPRPCRFFCHRCSAEINPRLPEYTCPRCESGFIE
ELSVERSTENGSTSTASTSDQNRPTFESMDHQHMFTFPPGYGQFALGIFDENFDLRAGLP
AEDNRETENRREREMASRQRYSARQPQGRHMPRRPGQRHEGVPTLEGIIQQLVNGIIAPT
AMPNIAMGPWGMLHSNPMDYAWGANGLDSIITQLLNQFENTGPPPADRERIKNLPSIQIT
EEHVGSSLECSVCKEDYSVGETVRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSLSGQNTA
TDPPGLSGMNFSPSSSSSSSSSSPSNENAANNS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcattttgtcggttgtcgctacccgtacacgttccctctcggttgtctggtagagaat
ccgaagatggctgaagctcccccacggccctgccggtttttttgtcaccgatgttcagca
gagatcaaccctcgtctcccggagtacacatgtccgcggtgtgaatctggcttcattgaa
gagctatcagtggagagaagcactgaaaatgggtccacatccactgcctccaccagcgat
cagaaccgtccgacttttgagagtatggaccaccagcacatgtttacatttccgcccgga
tacggccagttcgctctggggatttttgacgagaacttcgacctccgagcggggctgcca
gcagaagacaaccgcgagacggagaaccggcgggaacgggagatggcgtcacggcaacgg
tacagcgctcggcaaccacagggacgacacatgccacggcgaccaggacagagacacgaa
ggagtgcccacattagagggaatcatccagcagctagtgaatggaatcatagcacccaca
gccatgccgaacattgcaatgggaccatggggcatgctacactcaaatccaatggactac
gcttggggtgccaatggacttgattctatcattacccagttattaaatcagtttgagaac
actggtcctcctcctgctgacagagagaggataaagaacctgcccagcatccagatcaca
gaggaacatgtgggttccagtttagaatgttctgtgtgcaaggaagactacagtgtaggg
gagactgtgaggcaacttccgtgcaatcacctgtttcacaatgactgtatagtaccatgg
ctggaacagcacgacacatgtccagtgtgcagaaagagcctcagtggacagaacacagcc
acggacccccctggactttcaggaatgaacttctccccttcctcctcttcctcctcctct
tccagctcccccagtaacgagaacgctgccaacaactcctag
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