Salvelinus namaycush (lake trout): 120056118
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Entry
120056118 CDS
T07522
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04145
Phagosome
snh04814
Motor proteins
snh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120056118
09142 Cell motility
04814 Motor proteins
120056118
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120056118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120056118
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120056118
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
120056118
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
120056118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML
WD40_WDHD1_1st
WDR55
Dynein_IC2
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_IP5PC_F
Beta-prop_DCAF4
CAF1A_acidic
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
120056118
NCBI-ProteinID:
XP_038860233
UniProt:
A0A8U1ENM6
LinkDB
All DBs
Position
Sna11:complement(36946091..36959589)
Genome browser
AA seq
639 aa
AA seq
DB search
MADKQDKSELKAELERKKQRLAQIREEKKRKEEEKNKKKDGSDSKRGGEGGAAGAPDSSD
LEKKRREAEALLQSMGIAPDITNVPAPMSPSAKSMCSETGSQDSGDGNSRTLHWDPDPST
LQLHSDSELLGRGLRLGMAKVTQVDFPPKQSVSYSKETQTPTCTQTHTQAKPEEEEEEEE
MAEPKPAEESQEEKADQEEKREEVPPKDLTEEEKMQLLHSEEFMTFFDRGSRIVERALSE
RVDVCFDYSGRDLEDKEGEMQAGAKISLNRAFSDERWSKNRVVTCLDWSPQYPELLVASY
NNNEDAPHEPDGVALVWNMKFKKTTPEYTFHCQSAVMSAAFARFHPNLVVGGTYSGQIVL
WDNRSNKRTPVQRTPLSASAHTHPVYCVNVVGTQNAHNLISISTDGKMCSWSLDMLSQPQ
DSLELVFKQSKAVAVTSMAFPLGDVNNFVVGSEDGSVYTACRHGSKAGISDVFEGHHGPV
TGLSCHSAGGPVDFSHLFISSSFDWTVKLWTTKSTRPLYSFEDSCDYVYDVMWSPTHPAL
FACVDGSGRLDLWNLNNDTEVPSASVCVNGSPALNRVRWAHSGREIATGDSDGQVLVYDV
GEQICVPKADEWTRLVHTLVEINENRDEGEELAAQRLVA
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaacaggataagagtgagctgaaggcggagctggagaggaagaaacaacgt
ctggcccaaatcagagaggaaaagaagagaaaggaggaggagaagaacaagaagaaggat
gggtctgactctaagcggggaggggaggggggtgcagctggggcaccagactcgtctgac
ctggagaagaagaggagagaggctgaagctctactgcagagcatggggatcgcccctgat
ataaccaatgtccccgcccctatgtctccctcagccaaatcaatgtgcagcgagacagga
agccaggactctggagatggaaactctaggacgttacactgggatcctgacccctctact
ctgcagctgcactctgactccgaactactggggcgtggtttgaggcttggcatggcaaag
gtgacccaggtggatttcccacccaaacagtctgtgtcctactccaaggagacacagacc
cccacctgtacacaaacacacacacaggccaaaccagaagaggaggaagaggaggaggag
atggccgagcccaagccagcagaggagtcccaggaggagaaagctgatcaggaggagaag
cgggaagaagtccctcccaaagatctgactgaagaagagaagatgcagcttctccactcg
gaggaattcatgacgttcttcgatcgagggagcaggattgtggagcgcgctctctctgaa
cgagtggacgtctgctttgactacagtggccgagacctggaagacaaggagggtgagatg
caggcgggggctaagatatctctgaacagggcgttctctgacgaacgttggtccaagaac
agagtggtcacctgtctggactggtctcctcagtaccctgagctgctggtggcctcctac
aacaacaacgaggatgctcctcatgagcctgacggagtggctttggtctggaacatgaag
ttcaagaagacaacacctgaatacaccttccactgccagtctgcagtgatgtcagcagcg
ttcgccaggttccatcctaacctggtcgtgggtgggacttactcaggccagatcgtccta
tgggacaacaggagcaacaagagaacacctgtacagagaactcctctttctgcctccgct
cacacgcacccagtgtactgtgtgaatgtggtggggacccagaatgcgcacaacctcatc
agcatctcgactgatggaaagatgtgctcctggagcctggacatgctgtctcaaccacag
gacagtctggagctggtgtttaagcagtcgaaggcagtagcagtgacctccatggctttt
cctctgggtgatgtgaacaactttgtggtcgggagtgaagatggatcagtctacaccgcc
tgccgccacgggagtaaagcaggtatcagtgatgtgtttgagggacatcatggtccggtc
actgggttgagctgtcacagtgccgggggtcccgttgatttctcccatctgttcatctct
tcctccttcgactggaccgtcaagctgtggaccaccaagagtacccgtcctctgtattca
tttgaggacagctgtgactatgtgtatgatgtcatgtggtctcccacacaccccgccctc
ttcgcctgtgtagacggatctggacgcctggacctgtggaacctcaacaacgacacagag
gtgcccagtgcaagtgtgtgtgtgaatgggtctcctgctctgaaccgtgtgcggtgggct
cactcagggagagagatcgctacaggagactcagacggacaggtgctggtctatgacgta
ggggagcaaatctgtgtgcccaaggcagatgaatggacccgtttggtgcacacgctggtg
gagatcaacgagaaccgcgatgaaggagaggagctggccgcgcagcgcctagtcgcctga
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