Salvelinus namaycush (lake trout): 120056138
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Entry
120056138 CDS
T07522
Name
(RefSeq) calreticulin-like
KO
K08057
calreticulin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04141
Protein processing in endoplasmic reticulum
snh04145
Phagosome
snh04148
Efferocytosis
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120056138
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120056138
04148 Efferocytosis
120056138
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120056138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
snh03110
]
120056138
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
snh04091
]
120056138
Chaperones and folding catalysts [BR:
snh03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
120056138
Lectins [BR:
snh04091
]
L-type lectins
120056138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Motif
Other DBs
NCBI-GeneID:
120056138
NCBI-ProteinID:
XP_038860271
UniProt:
A0A8U1BMT2
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All DBs
Position
Sna11:complement(37905101..37915790)
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AA seq
413 aa
AA seq
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MQVLGSFAIILSIFSVQSTVYFQEQFLDGDAWKTRWLDSKHKADYGEWKLTAGNFYGDAE
KDKGLQTSQDARFYAASARFEPFSNEGKPLVIQFTVKHEQKIDCGGGYVKVFPSTLDQAE
MHGDSQYYIMFGPDICGYSTKKVHVIFNYKGKNHLIKKEVKCKDDELTHLYTLILNPNHT
YEVKIDNEKVESGTLEEDWDFLPAKTIKDPEAKKPEDWDDRPKMDDAEDTKPEDWDVAEN
IPDPDAKKPDDWDVDMDGEWEPPVITNPEYKGEWKPKQIDNPNYKGAWVHPEIDNPEYAA
DSTIYKFDDISVLGLDLWQVKSGTIFDNFLVSDDVKEAEEFGAETWGVTKEPEKKMKQEE
DDKKRKEEDEKNKEQATEAEEEGEEEEGEEEGEEEETPEEGTEEEEAPEKDEL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcttgggatcattcgcgataattctgtccatattttctgttcagtctaccgtt
tacttccaagaacaattccttgatggagatgcctggaagactcgctggctggactctaag
cacaaggcagattacggagagtggaaactgacagctggtaacttctatggcgatgctgag
aaggacaaaggtctacagaccagccaggacgcccgtttctatgccgcatcggcccgcttc
gaacccttcagcaacgagggaaagcctctggtgatccagttcactgtgaaacacgagcag
aaaattgactgtggtggcggttatgtcaaggtgttcccctccacccttgaccaggctgag
atgcacggagactcccagtactatattatgttcggccctgacatctgtggctacagcacc
aagaaggtccacgttatcttcaactacaagggcaagaatcacctcatcaagaaggaagtc
aagtgcaaggatgacgagctgacccacctgtacacactgatcctgaacccaaaccacacc
tacgaggtgaagattgataacgagaaggttgagtcaggcactctggaggaggactgggac
ttcctgccggctaagaccatcaaggaccccgaggccaagaagcccgaggactgggacgac
cgccccaagatggacgatgctgaagacaccaagccagaggactgggatgtggctgagaac
atccctgaccctgatgccaagaagcctgacgactgggacgtggacatggatggagagtgg
gagccacctgtgatcaccaacccagagtacaagggagagtggaagcccaagcagattgac
aaccctaactacaaaggagcctgggtccatcctgagatcgataacccagagtacgccgct
gactctaccatctacaagtttgatgacatcagtgtcctgggcctggatctgtggcaggtg
aaatctggcacaatctttgacaacttcctggtctcagatgatgtgaaggaagcagaggag
tttggagctgagacatggggtgttactaaggagccagagaagaaaatgaaacaggaggaa
gatgacaagaaacgtaaagaggaggatgagaaaaacaaagaacaagccactgaggcagaa
gaggaaggtgaggaagaggaaggtgaggaagaaggggaggaggaggagacgccagaggaa
ggaactgaggaagaggaggctccagagaaagatgagctatag
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