Salvelinus namaycush (lake trout): 120056153
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Entry
120056153 CDS
T07522
Name
(RefSeq) ski-like protein isoform X1
KO
K18499
Ski-like protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120056153
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Gene cluster
GFIT
Motif
Pfam:
Ski_Sno_DHD
c-SKI_SMAD_bind
Filament
betaPIX_CC
UBA_BRSK
Motif
Other DBs
NCBI-GeneID:
120056153
NCBI-ProteinID:
XP_038860287
UniProt:
A0A8U1BVM1
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Position
Sna11:38704230..38741651
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AA seq
758 aa
AA seq
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MASTQTSLKTPFEDLTSFKGNMKQLYRERIEDVPIKKRLMAEMNLKRRSLDPLPPLPWTP
KVKREAEEEQDREVDPGMTRSIEMDSRGEFQVCGAKALDLSPGLKHTLAAFTLSSARSLG
GPAAFSARSGHEASSSPGPGSYPGMAPLPSPPVLGGIPLLVPSDSSTELSHSLLEGESIS
CFAVGGEKRLCLPQVLNSVLRHFSLQQINSVCDELYVYCSRCDGEQLHILKVLGILPFNA
PSCGLITLTDAQRLCNALLRPGAVLPSEPVTKLPGQELLKETEASFQVEHQCLGKCQGLF
VPQFYAKPESPCIQCVECQLLFSPQKFVMHSHKSPDKRTCHWGFDSAKWPCYLQLGRKYL
GTAEEPQLKQLLEDMKDKFHYNRTSDKKVVEEDGEVRRSSPPEPLVSLNSKLADNDAAAK
VQAQATLVFPHIKEEPSHPSYNLYTYDKMVAPNVSLRDQPEVSSEVLGVLLKHHYSRRLA
HGHQDTAMGQYHTHTHLHASPPAPPVVNDAKSQQRVVPTADRDRQQPVSMETIPGNKSSS
AVAMTTSVAALGSKDVLSSVCEDDKERIVVEIVQMYSRQQEKLHSTLHNQLQLEMELEAL
RGGEAVRLQQLAAEQCELQSELEAVHTEHAHRLGQVREEQRELEHRLEQLRQQSCVCDNT
HQEERYANQLAELRGRLDGAEADRDKLQEELRSERDAREKLERIISQLQQQMGQTASTSA
SFVTTGSPSPPPTPSSHTPHTEGHTAGPAEQQNGHAHK
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggccagtactcagacgagtctgaaaaccccattcgaagacctgacctcgttcaagggc
aacatgaagcagctgtaccgtgagagaatagaagacgtgcccattaagaagaggctgatg
gctgagatgaacctgaagcgccgaagcctggaccctctgccccccctgccctggaccccc
aaggtaaagagggaggctgaggaagagcaggaccgggaggtggatccaggcatgactaga
tcaatagagatggacagtaggggggagttccaggtatgtggagcgaaagctttagacctg
agccctgggctgaaacacacgctggcagccttcactctcagcagcgcgcgctctctgggg
ggcccagcagccttctcagcccgctctggccacgaagcatcctcctcccccggccctggt
tcctaccctggcatggcacctctaccctcccctcctgtgctgggcggtatacccctgctg
gtgcccagtgacagctccacggaactcagccactcccttctcgaaggagaatccatctcg
tgcttcgccgtcggcggggagaagcgcctctgcctcccccaggtgctcaactcggttctc
cgccacttctccttgcagcagatcaattcggtgtgcgacgagctctatgtgtactgctcg
cgctgcgacggggaacagctccacatactcaaggtgctgggtattttacccttcaatgct
ccgtcctgcggcctcatcaccttaactgacgcccaacgcctctgcaacgccctcctccgc
ccgggggctgtactcccctccgaacccgtcaccaagctacccggccaggagctcctcaag
gagacggaggccagcttccaggtggagcaccagtgtctggggaaatgccagggtctgttc
gttccccaattctacgccaagcccgagtcgccctgtattcagtgcgtggaatgccagctg
ctcttctctccacagaagtttgtgatgcactctcacaagtcgccggacaagaggacctgt
cactggggctttgactcggccaaatggccgtgctacctgcagctggggaggaagtacctg
ggaacggcagaggaaccgcagctcaaacagctgttggaggacatgaaggacaagttccac
tacaaccgaaccagcgacaaaaaggtggtagaagaggatggcgaggtgaggagatcgtct
cctccagagcctctagtgtctcttaacagtaaactagccgacaacgacgcagcggccaag
gttcaagcccaggctactctggtgttcccccacatcaaggaagagcccagtcaccccagt
tacaacctgtatacatatgataaaatggtggctcctaatgtgtctctgagggatcagcca
gaggtcagctctgaggttctgggggtgctgctcaaacaccactacagtaggagactggcc
cacggccaccaagacactgctatgggtcagtaccacacacacacacatctccatgcctct
ccccctgctcctcccgttgtcaatgacgccaagtctcagcagcgcgttgttcctactgcc
gatcgggaccgccagcagccagtttccatggagaccatccccggcaacaagagttcttct
gctgtagcgatgaccacgtcggtagcggcgctggggagtaaagatgtcctgtcttctgtc
tgtgaggacgacaaggaaaggatcgtagtggagatcgttcagatgtacagcagacagcag
gagaagctgcattccaccctgcacaaccagctgcagctagagatggagttggaggcgctg
cgtggaggcgaggctgtcaggctgcagcagctggcagcagagcagtgtgagctgcagagt
gagctggaggcggtgcacactgagcatgcccacaggctggggcaggtgagggaggagcag
agggagttggagcacagactggaacagctgaggcagcagagctgtgtgtgtgacaacaca
caccaggaggaacgctatgctaaccagcttgcagagctgcgtgggaggttggatggtgcg
gaggctgaccgggataagctccaggaagagttgaggagtgagcgggatgcccgggagaag
ctggagagaatcatctctcagctccaacagcagatgggccagacggcctccacctcggcc
tccttcgtcactacagggagcccctctccgccccccaccccctcctctcacaccccccac
acagagggacacactgcaggccctgccgagcagcagaacggccatgctcataagtag
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