Salvelinus namaycush (lake trout): 120056165
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Entry
120056165 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120056165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120056165
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120056165
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120056165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_2
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf_RING_Vps8
PHD_NSD
zf-UDP
zf-ANAPC11
zf-C3HC4_2
zf-RING_5
zf-RING_4
WWE_5
Motif
Other DBs
NCBI-GeneID:
120056165
NCBI-ProteinID:
XP_038860302
UniProt:
A0A8U1BVM8
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All DBs
Position
Sna11:complement(39532301..39563147)
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AA seq
639 aa
AA seq
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MIRPVRRSFYDPTSAPGQGWLWEWENDAGSWTQYDTEVGIAIQTARDRQQPWLDLAPLGF
CYLVDLQGMTQINRQTQRQRRIQRRSDVAYPLVSGPVPRNGGGGSGLTGALLGVGVSGVN
GGVVYPSGGLATMQSLAGQPCSCQQCMLVFCVKQSTVRSSTHKLGHRPSKPQSKPPSPKS
ATLGRGQLRSSPARSAYSKTLPHGLSISRNQSSPRRNAALFARSLSLLSAQTGTLSISNR
PPPPSLPPPQPPSSNQGRRPSAPPPSPSATSQPVPTATLVTPATAVTSPPSPVPSPSPRP
MAPQRAAVCSAPLPQRSSLAGLSRPALQRIAMAQSRALIASGVPTVPVKNLSGNNPVHPA
LAGITGILMSAAGFPVCLTRPPKLVLHPPPVSKRDIKPVPGLGHCCRKTTKKQARKGKTT
EEVVKQYLQKVRIAPEEDCTICMEALGGPSGYKGGDFIGRLAQCGHQYHLQCLVAMYNNG
NKDGSLQCPTCKTIYGVKTGNQPPGKMEYHVIPHSLPGHPDCKTIRVIYNVLPGIQGPEH
PNPGKPFTARGFPRHCYLPDSEKGRKVLRLLLTAWDRRLVFSVGTSSTTGESDTVIWNEV
HHKTEFGSNLTGHGYPDPSHLDNVLDELKAQGITEEEEQ
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgatccggccggtgcgccgtagcttctacgaccccacgtcggcgccgggccagggttgg
ctgtgggagtgggagaacgacgcgggctcctggacccaatacgacacggaggtcggcatc
gccatccagacggcccgggaccgccagcagccctggctggacctggcgccgctgggcttc
tgctacctggtggacctgcagggcatgacccagatcaacaggcagacccagagacaacgc
aggatacagcggaggtccgacgtggcctacccactggtgtcaggaccggtacccaggaac
ggaggtggaggatcgggtctgacaggagcgttactgggtgttggggtgtcgggcgtcaac
ggaggcgtggtgtacccaagcggcgggctggcgaccatgcagtccctcgccgggcagccg
tgctcctgccagcagtgcatgctggttttttgtgtgaagcagagcactgtgaggtcatcg
acccacaagttgggacaccggccgagtaaacctcagagtaaaccacccagccccaaatct
gccaccctggggcggggccaactcaggagctcccccgctagatctgcctactccaaaacc
ttacctcacggactctccatatcccggaaccagtcctcaccgcgacggaatgccgccctc
ttcgcccgctccctctccctcctcagcgcccaaacgggcaccctctccatctccaaccga
ccccctcctccctccctcccgccccctcagccgccctcctccaatcagggccgtcgtccg
tccgcgccgcccccctctccctccgccacgagtcaaccggtgcccaccgccacgctcgtc
accccggcgaccgccgtgacgtcaccgccctcgcccgtgccgtccccgtcgccgcggccc
atggcgccccagcgcgcggcggtgtgctctgcacccctgccccagcggtccagtctggct
gggctcagccggcccgccctgcaacgcatcgccatggcccagtcacgagccctcatcgcc
tctggcgtgcccactgtcccagtgaagaacctcagtgggaacaacccggtccacccagcg
ctggccggtatcacggggatcctgatgagcgctgcggggttccctgtgtgtctcacccgc
ccccccaaactggtgctgcaccccccgcccgtcagcaagagggacatcaagcccgtcccc
ggcctgggccactgctgccgcaagaccaccaagaaacaggcccgcaaaggtaagacaaca
gaggaggtggtgaagcagtatcttcagaaagtcaggatagcaccagaggaggactgtacc
atctgtatggaggccctcggggggccgtcaggctacaagggtggtgacttcataggtcgc
ctggcccagtgtgggcaccagtaccacctccagtgtctggtggccatgtacaacaacggc
aataaagatggcagcctgcagtgccctacctgcaaaaccatctacggcgtgaagacgggc
aaccagccgcccgggaagatggagtaccacgtcatcccccactcgctgcccggccacccc
gactgcaagaccatccgcgtcatctacaacgtcctgcctggcatccagggcccagagcac
cccaacccaggcaagccctttacagccagagggttcccgcgccactgctacctcccagac
agcgagaagggacgcaaggtactcagactcctgctgactgcgtgggaccggcgcctggtc
ttctcggtgggcacgtccagcaccacgggcgagtcggacacggtcatctggaacgaggtg
caccacaagacggaattcggctccaacctcacgggccacggctaccccgaccctagccac
ctagacaacgtcctggatgaactgaaagcacagggcatcaccgaggaagaggagcaatga
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