Salvelinus namaycush (lake trout): 120056172
Help
Entry
120056172 CDS
T07522
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like
KO
K09299
zinc finger homeobox protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120056172
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
120056172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
Homeodomain
zf-C2H2_15
zf-C2H2_jaz
zf-Di19
zf-met
Motif
Other DBs
NCBI-GeneID:
120056172
NCBI-ProteinID:
XP_038860312
UniProt:
A0A8U1BWA4
LinkDB
All DBs
Position
Sna11:40063516..40180224
Genome browser
AA seq
1072 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNNVVEAQSDSDDEDKLHIVEEDPDGDGTVPEDTAAVD
QSTSLKGREEERGRGRECGSEEEEEEEEEDEEEEEGGKDALVEEMIQQGDTAVIYPKAPD
GKQKSAPERGVPEKTGTPDTLSQLLTCPYCSRGYKRCTALKDHIKLRHEKSEDNFSCSQC
SYTFTYRTQLDCHMTQHKNQHKDPVQRHVPQTTTTTITTGGNRKFKCTECSKAFKYKHHL
KEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCVGMVPVNGNPSPVIKVSNQTPSQ
TQPSGPAAAPVRVLLLGEKTDSKPLQEQLPHTQIKSEPVDYEFKPVVMAPNGATGTNGTV
FNGGVTLPQGTALPQGMVQAVVLPTMGLMSPISINLSDLQNMLKVAMDGNVLRQVLGTAN
GLVTSKQGFVTQAGQQVISAISLPGFVDQDGTTKIIINYSLEPSPAQQPTAPQLLKQEAP
PPTTNTNTASATNTQSASKVTEKLPQDLNINETEPADSERESEMETETEAETPKAQTGKT
RCLLCDNCPGDLNELHMVQHCQPVNAPLDPSIAALMAEAGITPGQHPLKNLLSLLKAYFA
LNAEPTEEELAKISDNVSLPVDVVKKWFEKMRSGQITVGPPGSSPDDSGLSDSSTETQLD
QEKSRTEIEEQHASAQTQETSSSQPPNSSPASTSPSVSASAPSPLNLSSSGLVIVKTEVD
SEREAQDLPLDLSLPKQPQSQPQVPHVPQEQPLNLTCLKETVQAQLPGLQGTTNTIYVTS
SPQTTIPNPVNIMTTRLVAITNQGSGVPCLRAISTGTTKRTILIPQLTYTYTTTACRGAT
GADGAQKTVRINGCQEEKSATSSEVVSTVEEQDNSDSSPPQKKMRRLQSGMYSCDLCDKI
FQKSSSLLRHKYEHTGKRPHECGICDKAFKHKHHLIEHTRLHSGEKPYRCDKCGKCFSHS
GSYSQHMNHRYSYCKKEPRGGRQGGRQLGMSPEMSPQTEEQQSDSRPTSPPSQLDSDERE
SEEELEEEEGMAAMSMDDIRVVQVGEDDEESEIYEVEEFGGERQEEEEGSRE
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaacccgaggaggaataacgta
acgaattacaacaacgtcgtggaggcccagtcagattctgacgatgaggacaagctacac
atagtggaggaggaccctgatggagacggcacggtgccagaagacaccgcagcagtagat
caaagcacatcattaaaaggaagagaggaagagagaggtagaggcagagagtgtggctca
gaagaggaggaggaggaggaggaggaggatgaggaggaagaggaggggggtaaggatgct
ctggtagaggagatgatccagcagggagacacggcggtcatctaccccaaggctccggac
ggcaaacagaaaagcgcgcctgagagaggggtcccagagaagaccggcacgccagacacc
ctctcccagctcctgacttgtccgtactgctcacggggctacaagcgctgcacggccctg
aaggaccacatcaagctacggcacgagaagagcgaggacaacttcagctgctcccagtgc
agctacaccttcacctaccgtacacaactggactgtcatatgacccaacacaagaaccaa
cacaaggatcctgtacagcgtcatgtaccccagaccaccaccacaacgataacaacaggg
gggaacaggaagttcaagtgtactgagtgttccaaggcttttaaatataagcaccacctg
aaggagcatcttcgcatccacagcggagagaagccgtacgagtgcccaaactgtaagaag
aggttttcccactcagggtcctacagttctcacatcagcagtaagaagtgtgttggcatg
gtgcctgtcaacggcaaccccagcccagtcattaaggtctccaaccagacccccagccag
acccagccctctggccccgccgcggccccagtccgagtgctcctcctgggggagaagaca
gacagcaagcccctgcaggagcagctcccccacactcagatcaaatctgagcctgtggac
tatgagttcaagccggtggtgatggcgcctaacggggcgacggggactaatgggacggtg
tttaacggtggcgtgacgctaccccagggcacggcattgcctcagggcatggtccaggcg
gtggtactgcctaccatgggtctgatgtctccaatcagtattaacctcagcgacctgcag
aacatgctcaaggtggccatggatgggaacgtgctgcgtcaggtgttggggacggccaac
gggctggtgacctccaagcaggggtttgtgacacaggctggccagcaggtaatctcagcc
atcagcctgcctggcttcgtggaccaggacggtaccaccaagatcatcattaactacagc
ctggagccaagcccagcccagcagcccaccgcccctcagctcctcaagcaagaggctccc
cctcccaccaccaacaccaacaccgccagcgccacaaacacacagtcagcctccaaagta
acagagaaactcccccaggacctcaacatcaacgagaccgagccggccgactcggagcgc
gagtcagagatggagacagagactgaagctgagacaccaaaggcccagacaggcaagaca
aggtgtctactgtgtgacaactgtcctggtgatttgaatgaactgcacatggtccagcat
tgtcaacctgtcaacgcccccctcgacccctccatcgccgccctcatggccgaggcaggg
ataacaccaggccagcaccctctaaagaatctgctctcactcctcaaggcctacttcgcc
ttaaacgccgagcctaccgaggaagagctggccaagatctctgacaatgtcagcctgccc
gtggacgtggtcaagaagtggtttgagaaaatgcggtctggtcagatcacggttggaccc
cctggttcctctccagatgactctggactttcagattccagcacagagacccagctagac
caagagaagagcaggacagagatagaggagcagcatgcctcagcccaaacacaggagaca
tcatcttcccaacctcccaacagttcccctgcctcgacgtccccctcggtctcagcctcg
gccccctcaccactaaacctctcctccagcggcctggtcatcgtgaagactgaggtcgac
tctgagcgcgaggctcaagatcttcccctggacctgtcccttcccaagcagccccagtca
cagccccaggtcccccatgtcccacaggagcagcccctcaacctcacctgcctgaaggag
acagtccaggcccagctcccagggctccagggaaccaccaacaccatctacgtcacctcc
tccccccaaacgaccatccccaacccggtgaacataatgaccacccggctagtagccatc
accaaccagggcagcggtgtgccctgcctcagggccatctccaccggcaccaccaaacgg
accatcctcatcccccagctcacatacacatacaccactacagcatgcagaggggccact
ggggccgacggagcccagaagaccgtcagaatcaacggctgccaggaggagaagtctgcc
accagctcagaggttgtgtcgacggtagaggagcaggataactcagactcttcccctccg
cagaagaagatgcgtcgactgcagagcgggatgtactcctgtgacctgtgtgacaagatc
ttccaaaagagcagctccctgctcaggcataaatacgaacacacaggaaaacggccacat
gagtgcggcatctgcgacaaagccttcaaacacaagcaccacttgatagaacacacgcga
ctgcactccggagagaagccctaccgctgtgacaagtgtggcaagtgtttctcccactct
ggctcctacagccagcacatgaaccaccgatactcctactgcaagaaggagccccgggga
gggcggcaggggggacgccagctcgggatgagccccgaaatgagtcctcaaacagaagag
cagcagtcagacagccgacccacctccccaccttcccaactggactcagacgagagggag
agtgaggaggagctggaggaagaggagggcatggcggccatgagcatggacgacatacgg
gtggtgcaagtgggtgaggatgacgaggagagtgagatctacgaggtggaggagtttggg
ggggagaggcaagaggaggaggaagggagcagagag
DBGET
integrated database retrieval system
