Salvelinus namaycush (lake trout): 120056310
Help
Entry
120056310 CDS
T07522
Name
(RefSeq) astrotactin-1-like
KO
K24479
astrotactin
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120056310
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
120056310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASTN_1_2_N
Annexin_2
ASTN1_2_fn3
FXa_inhibition
fn3
TM_ErbB1
Pur_ac_phosph_N
NDNF
Motif
Other DBs
NCBI-GeneID:
120056310
NCBI-ProteinID:
XP_038860477
UniProt:
A0A8U1BWJ2
LinkDB
All DBs
Position
Sna11:16805410..17053150
Genome browser
AA seq
1302 aa
AA seq
DB search
MPGMMMDLRLLFSLAWILTFKAANIQGLNADEDHSQDLECKMKSVTVSALPFLRENDLSI
MHSPSASEPKLLFSVRNDFPGEIVVVDDLENTELPFFVLEITGNSEDIPLVRWRQQWMEN
GTLLFHIHHQDGSQNLPGLSATDYPASDSAEEELRILHISVMGGMIALLLSILCLVLILY
TRRRWCKRRRVPQPQKSASAEAANEIHYIPSVLMGGQARESLRNSRGQGHNSSGTLSIRE
TPILDGYEYDITDLRHHLQRECMNGGEDFASQVTRTLDSLQGCNDKASMDLTPGDDNTKL
SLMNKYKDNIIATSPIDSNHLQQNTLLPHNTSTSQRKQRLSSKTRAGSTFLNPDGDSGTE
ADSEPQLTFYTDPNRSRRRSRAGSPRSPINKTTLTLISVVSCVIGLVYSSHLSCGLNVRV
VLHVPEHLIADGSKFILLQGSQLDASDWLNPARVLLYYQQNASGPWINELCGRRILDPCE
HQCDPETGDCLCLDGYMKDPVHKHLCIRNEWGPNQGPWPYTIFQRGFDLVMGEQPSDRIF
RFTYTLGEGMWLPLSKSFVIPPAELAINPSAKCKTDMTVMEDAVDVREELMISSSFDSLE
VLLDSFGPVRDCSKDNGGCSRNFRCISDRKLDSSGCVCPPGLSPMKDGTGCYDHHIGIDC
SDGFNGGCEQLCLQQLAPLEDDPTLYNIQMFCGCIEDYKRGQDGRSCQPLSEACTEGLDC
GETADVPANQTVFGDLFYGYNNHTKEIISGQILKATFRQKNFARGIEQQLPDGMVVASVP
TDVQCHEELSDPVPDPDYLTGMVNYSEVSGYPLIQHWKLRSVLYHVKLNQWVLSQAFSSA
IHSLDGATLRHDFVSILREFGNHFVQEAVYGFEEACTIWYPNKQVQRQLWLEYQDISKGN
SPSEESEERDKEPRTLTYPAYIASLLDSGAKRMAAGVRMDCSSQGQCPYSCHLCHMSPGP
GRPAEPVLLQITKAAPLYELVSNNHTYQALQEAMMSMLWCSGKGDVIDDWCRCDSSAFGT
DGLPTCAPLPQPRLRLSHSYEPSSSLVIVEWNHTEPPIGVRIVDYLISQEKVTERTDHSK
METETMLSFVDDILSGAKSPCVMLGDIPDLLTSSVSMIIRCLEPDTTYMFRLWAVDNTGR
RSSPSEVTIKTPCPAVDDVKAQEIADKIYNLFNGYTSGKEQQTAYNTLMDLGSPTLHRVL
YHYNQRYESFGEFTWRCEDELGPRKAGLILSQLDDLSGWCRGLLQEPKIGLRRMSLKYLS
CRYTDTKAFGLNWVDLGQDVRKACDEQNLPVMYNDYGEPKER
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgccaggcatgatgatggatctgagattgcttttctcgctcgcatggattcttaccttc
aaagctgctaatattcaaggtttgaatgccgacgaggaccattcccaagatttggaatgc
aaaatgaaaagcgtcaccgtgtctgcgctgccgtttttgagagaaaacgacctgagcatc
atgcatagtccgtcggcctccgagcccaagcttctgttctccgtcagaaatgattttccg
ggggaaatagtcgtcgtggacgatctagaaaacaccgagctcccctttttcgtcctagag
atcacaggaaactctgaggacattcctctggtgcgatggcggcagcagtggatggagaac
ggcacgctgctctttcacatccaccaccaagatggcagccagaacctccccggcctgtcc
gccacagactaccctgccagcgactctgccgaggaagagttacgcatccttcacatctct
gtcatgggaggcatgatcgccttgctgctgtccattttgtgcctggtcctcatcctctac
acgcgcaggcgatggtgcaaacgccgccgtgtgccccagccccagaagagcgccagcgcc
gaggcagccaatgagattcactacatcccttcggtgctgatgggaggccaggccagggag
agcctgagaaactccaggggccagggtcacaattccagtggcacgctcagcatccgagag
acgcccatcctggatggatacgagtatgacatcactgacctgagacaccacctgcagaga
gagtgcatgaacggaggagaggactttgccagccaggttacacgcaccctggactccctt
cagggctgcaatgacaaggccagcatggacctcacacctggggatgacaatacaaagttg
tccctaatgaacaaatacaaggacaatatcatagccaccagccccattgacagcaatcac
ctgcagcagaacactctcctcccccacaacacctccaccagtcaacgcaaacaacgtctg
tccagcaaaacccgagcgggttcaaccttcttaaacccggacggggactcaggcacggag
gccgacagcgaacctcagctgaccttttacactgaccccaatcgcagcaggcgccgcagc
cgagcaggttccccacgaagccccatcaataagaccaccctgactttgatcagcgttgtc
agctgtgtgatcggcctggtgtactcctcacacctctcctgtggcctcaacgtccgggtc
gtcctccatgtgcccgagcacctcatcgcagacgggtccaagttcattttgctgcagggc
agtcaactggatgcgtctgactggctgaacccggcccgggtgttgctatactaccagcag
aatgccagcgggccttggatcaatgagctgtgtggccgtcgcattctggacccctgtgaa
caccagtgtgatccagagacaggtgactgtctatgcttagatggctacatgaaggaccct
gtccataagcatctctgtattcgtaacgagtggggtccaaatcaaggaccttggccgtac
actattttccagcgtggttttgatctggtgatgggagaacaaccatctgatcgcattttc
aggttcacatacacattgggggaagggatgtggttaccattgagtaaaagctttgtcatt
ccacctgctgagctggcaatcaacccatcagccaagtgcaagactgatatgactgtcatg
gaagatgctgtggatgtgagagaagagctgatgatctcctcatcgtttgacagtctggag
gttttactggactcgtttggcccggtgcgtgactgctcaaaggacaacggtggttgtagc
cgaaacttccgctgcatctctgaccgcaagcttgattccagtggatgtgtgtgccctccg
ggactgagccctatgaaggatggcacaggctgctacgaccaccacattggcatcgactgc
tctgatggcttcaacggaggttgtgaacaactgtgcctccagcagctcgcccccctggag
gacgaccccaccctctacaacatacagatgttctgcggctgtattgaggattacaagaga
ggtcaagatggtcgttcctgccagcccttgtctgaagcctgtactgagggactggactgt
ggggaaacagctgacgtcccagccaaccaaaccgtttttggggacctcttctatggctac
aacaaccataccaaggaaatcatctctggtcagatcctcaaagctaccttcaggcagaag
aactttgcccgaggcatcgagcagcagctcccagatggcatggtggtggcatcagtgcca
accgacgtgcagtgccacgaagagctgtcagacccagtccctgatccagactatctcaca
ggaatggtgaactacagtgaggtctctgggtacccactcatccagcattggaagctgagg
tctgtcctgtaccatgtcaaactgaaccagtgggttctctctcaagctttcagctctgcc
atccactccctcgatggtgccaccctccgccatgattttgtctccatcctcagggagttt
ggtaatcactttgtacaagaggctgtgtatggcttcgaggaggcctgcactatctggtac
cccaacaagcaggtccagagacagctgtggctggagtaccaggacatcagcaaagggaat
tccccatcagaagagtcagaggagcgtgacaaggagccccgaaccctgacctacccagcg
tacatcgccagcctgctggactctggtgccaagcgcatggcggcgggggttcgcatggac
tgcagcagccagggccagtgcccgtactcctgccacctctgccacatgagccctgggcct
gggcgtccagccgagcctgtcctgctccagatcactaaggccgccccgctctacgagctg
gtctccaacaaccacacctaccaggcactgcaggaggccatgatgagcatgctgtggtgt
tctgggaaaggtgatgtaatcgatgactggtgccgttgtgactcaagtgcattcgggaca
gatggactgccaacatgtgcccctctccctcagcctaggctcaggttgtcccactcctat
gagcccagcagttcattggtcatcgtggaatggaatcacactgagccaccaatcggggtg
cggatcgtggattacctcattagccaggagaaagtgacagagaggacagaccactccaaa
atggagacagagacaatgttgagctttgtggatgatatcctgtctggggccaagtctcca
tgtgtgatgcttggggatatccctgacctcctgacctcctccgtcagcatgatcattcgc
tgcctggagccagacaccacttacatgtttaggctctgggcagtggacaacacaggccgt
cgctccagcccaagtgaggtcaccatcaagaccccctgccctgctgtggatgatgtcaaa
gcacaagagattgcagacaagatctacaacctgttcaatggttacacaagtggcaaggag
cagcagacggcctacaatacgctgatggatctgggctctcccaccctgcaccgtgtgctc
taccactacaaccagcgttatgagagcttcggagagttcacctggagatgcgaggatgaa
ctggggcccaggaaagctggtctgattctctcccagctggatgacctgagtggatggtgc
aggggtcttctccaggagcccaagatcggcctgcgcaggatgtccctcaagtatctgtcc
tgccgctacacagacaccaaggcctttggtctcaactgggtagacctgggacaggatgtg
cgaaaggcctgcgatgaacagaacctgccagtcatgtacaatgattatggggagcccaaa
gaacgttga
DBGET
integrated database retrieval system