Salvelinus namaycush (lake trout): 120056313 Help Entry 120056313         CDS       T07522                                  Name (RefSeq) tenascin-R-like   KO K06252   tenascin Organism snh  Salvelinus namaycush (lake trout) Pathway snh04510   Focal adhesion snh04512   ECM-receptor interaction snh04518   Integrin signaling Brite KEGG Orthology (KO) [BR:snh00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     120056313    04518 Integrin signaling     120056313  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     120056313  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:snh00536]     120056313 Glycosaminoglycan binding proteins [BR:snh00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120056313 SSDB OrthologParalogGFIT Motif Pfam:  fn3 Fibrinogen_C EGF_TEN EGF_Teneurin FN3_DSCAM-DSCAML_C Fn3_Dep-1_3rd Fn3_PBP1 Pur_ac_phosph_N FN3_Tor_3rd Fn3_Dep-1_2nd Fn3_VIN3 EGF_Tenascin EGF_2 Interfer-bind DUF4998 Fn3_Dep-1_1st DUF7949 Motif Other DBs NCBI-GeneID:  120056313 NCBI-ProteinID:  XP_038860480 UniProt:  A0A8U1C460 LinkDB All DBs Position 11:17307923..17364425 Genome browser AA seq 1365 aa AA seqDB search MAPARGWLLGLALAFLLLGSQAAPSLSGEEQKLVRTTRVRRQAPPGGPTSPLNNQTIKEQ PMVFNHVYNINVPLESLCSVDLESAAPPPSQASRGAMSSGGGEDPTEFTEQTVDTDSQVT FTHRINIPKQACACPAANTMQQLATRIEMLEREVSLLRVQCSSGNCGCEESSAMGRLDFI PQCSGHGSFNMDLCGCVCEYGWTGKNCSEPRCPDDCSGQGECMEGECVCDRDFGGDNCSE PRCPADCSGRGLCMDGECICEENFTGEDCTLGRCLNDCSDQGLCTNGTCQCRPGYVGEDC SLAYCANNCSQKGICKEGFCACQEGFAGDDCSLVAPDLNLRVRGVTERTIDLEWEGLVLM TDYLVTYVATSPGGVQLEIRVPGNITNCSIPDLEPGIEYNINVYAVLNNVISVPANAQVS TYLSNPDGLVFKSITETSVEVQWQPFYYSFDGWEISFIPKDNDGGMTAQLPSTITSFHQT GLRPGEEYTVNLVALRDQGRSQPVSAIVTTLIDGPTQLIVRDVSDTVAFVEWTNPKAKID QIVLRYGLVGGDGPKTTFRLQPTLSQYSLQVLRPGSRYEVSISGVRKGNESGTISTEFST EIDAPKNLQVLSKASTTLELEWDNSEAEVEGYQVVYSTLAGDRYEKVIVPRNDGPTSRTT LTDLLPGTEYGIGISAMLGTNQSSPATMNARTGLDVPMDLTVTASTDNTITLLWGVVQGP IDHYMVTYTSSSGLTMEVTVPKDVTTTTLNDLEPGTEYTITVAAQRGRQQSTAATIDAFT GFSPVIALYLSDITWDSVTVAWSAPAPPADLYILSYSSEDGTDTSKVTLDGSKTRSSVEG LLPSTQYTVSLITIQGEVTSEAVTATLTTGMDPPKEMTVSYVTEDSVIISWLRPFAAFDY YKMSYQSARGRVDSIVIDNDVTNYTLSSLHPATEYEINLNAVRGSQESKSITTSVFTAMD MPMELTALNITPQGALLQWNPPLSSVDNYVLTLTCNQVTADTFLVEGGKQEHQLTKLLPS TTYSVALYATKGPLTSGTVIANFATPMDAPLNLTASEVNHRSALISWQPPIADIDNYMLT YKSADGSRKELILDAEDTWIRLEGLAETTEYTVRLQAARGLETSDIISTAFTTGNRLFAT PQNCAQHLLNGESLSGVYTIYINRDANQGVQVYCDMTTDDGGWIVFQRRQNGLTDFSRKW SDYRVGFGNLEDEFWLGLDNIQKLAAQGRYELRIDMKDGQESVYANYDKFAIGDARNFYK LRIGEYNGTAGDALIYHQGRPFSTKDRDNDIAVTNCALSYKGAWWYKNCHRANLNGKYGE SRHSQGINWHNWKGHEFSIPFVEMKMRPFNYRSISGKRRRSTPPE NT seq 4098 nt NT seq  +upstreamnt  +downstreamnt atggcccctgcacgtggctggctgctgggcctggctctggctttcctccttctggggtcc caggctgctccatccctatccggtgaggagcaaaagctggtccggaccaccagggtcaga cgacaggcccctccaggtggccccaccagcccacttaacaaccagacaatcaaggagcag cccatggtcttcaaccatgtgtacaacatcaatgttcccctggagtctctgtgctctgtg gatcttgaatcagcagcacctccacccagtcaggcctccaggggagcaatgtccagtggg ggtggggaggaccccacagagttcacagagcagacagtggacacagacagccaggtcacc ttcacccaccgcatcaacatccccaaacaggcctgcgcctgtcccgcagccaacaccatg cagcagctggccacccgcatcgagatgctggagagagaggtgtcgctgctcagagtccag tgcagctctggcaactgtggctgtgaggagagttcagccatgggtcgcctggacttcatc ccccagtgcagtggccacggcagcttcaacatggacctgtgtggctgtgtgtgtgagtac ggctggacgggcaagaactgctctgagcctcgctgcccagacgactgctccggacaggga gagtgtatggagggcgagtgtgtctgtgaccgcgacttcggaggggacaactgctcggag ccccgctgcccggcggactgctccggtcgagggctgtgcatggacggggagtgtatatgt gaggagaatttcactggagaggactgtacgcttggtcgctgcctcaatgactgctctgac cagggcctgtgcaccaatgggacctgccagtgtcgcccgggatacgtgggagaagactgc tccttggcctactgcgccaacaactgcagtcagaagggcatctgtaaggagggcttctgt gcctgccaagagggctttgctggagacgactgctctttagtggctccggatctgaacctg cgtgtgcggggagtgacagagcgtaccattgacctggagtgggaggggttggtgttgatg acagactacctagtcacctacgtggccaccagcccaggtggggtccagctggagatcagg gtccctgggaacatcaccaactgcagtattccagacctggagcctggcatcgagtacaac attaacgtctacgctgtgctcaacaacgtcatcagtgttcctgccaatgctcaggtatca acctatctctcaaatccagacggtttagtcttcaaatccatcacagagacatccgtggag gtgcagtggcaaccattctactactcgtttgatggctgggaaataagcttcattccaaag gacaatgatggagggatgacagcccagctgcccagcaccattacttcattccaccagaca ggcctgagaccaggggaggagtacaccgtcaacctggtagctctcagggaccagggccgc agccagcccgtatccgccatcgtcaccacattgattgatgggccgactcagctgatagtg cgtgacgtctcggacacggtggccttcgtggagtggaccaatcccaaggctaagatcgac cagatagtactgcgttatggtctggtggggggggacgggcctaagaccaccttccgtctg cagcccacactcagccagtactccctgcaggtgctgagaccaggctcgcgttacgaggtg tccatcagtggtgttcgcaagggcaatgagagtggaaccatctccacagaattcagtacc gagatcgacgcacccaagaacctgcaggtgctgtccaaggcctccaccaccctggagctg gagtgggacaacagcgaggcggaagtagaggggtaccaggtggtctacagcaccctggca ggggaccggtacgagaaggtcatcgttccacgcaacgatggacccaccagcagaaccaca ctcacagacttgttgccaggtacagagtatggcattggtatttcggccatgcttggcacc aaccagagttctcctgccacaatgaatgccagaactggtctagatgtccccatggacctg actgtgacggcgtccacagacaacaccatcaccctgctgtggggggtggtccaggggcct atcgaccactacatggtcacctacacctcctcatctgggctgaccatggaggttactgtc cccaaggacgtgaccaccaccactctcaatgacctggagccaggcacagaatacaccatc actgtagctgcccagagaggcaggcagcagagcactgcagccaccatcgatgccttcaca ggcttcagccctgtcattgcgctttacttgtctgacatcacgtgggactcggtgacggtg gcatggagcgccccggccccacccgcagacctttacatcctcagctacagctctgaggat ggcactgacacctccaaggtcaccctggacggatccaagacccggtcctctgtggagggt ctcctgccctccacacagtacacagtcagccttatcaccatacagggagaggtgacgtct gaagctgtcacagccacgctcaccacaggaatggacccacctaaagagatgactgtgtca tatgtcactgaagactctgtcatcatatcatggttgagaccttttgccgcctttgactat tacaagatgtcctaccaatcagcaagagggcgagtggacagcatcgtgattgacaacgac gtgaccaactacaccctgtccagcctccacccggcaacagagtatgagatcaacctgaac gccgtgaggggaagccaggaaagcaagtccatcaccaccagtgtcttcacagcgatggac atgccaatggaactgacagccctcaatattaccccacaaggagcgttattgcagtggaac cctcctctgtccagcgttgacaactacgtgctcaccctcacctgcaatcaggtgacagct gacaccttcctggtggagggtgggaaacaggagcaccagctcactaagctcttgcccagc accacctactctgtagccctctacgccaccaagggacccctgaccagtggaacggtcatc gccaactttgcaacacccatggacgctcctttgaacctgacggccagcgaggtgaaccac cgcagtgccctcatctcctggcaaccgcccatcgcagacatcgacaactacatgcttaca tacaaatcagctgatggcagcagaaaggagctgatcctggatgcagaagacacgtggatc cgtctggagggcctggcagagaccacagaatacactgtgaggttgcaggctgccagggga ttagagaccagcgatattatctctacggccttcacaacaggaaaccgtctgtttgccacc cctcagaactgtgcccagcatctgctgaacggggagtccctgagcggcgtctacaccatc tacatcaacagagacgccaatcagggagtgcaggtctactgtgatatgaccacagacgac ggaggctggatcgtgttccaacgtcgtcagaatggccttaccgacttctccaggaagtgg agtgactacagggttggctttgggaacctagaggatgaattttggctcggtttggacaac atacagaagcttgcagcccaaggtcgctacgagctccggatcgacatgaaggatggccag gagtctgtctatgccaactatgacaagttcgccatcggagatgccaggaatttttacaaa ctcaggataggagagtataatggcacagctggggacgcactgatctatcaccaaggccgt cccttctccaccaaggacagagacaatgacattgctgtgaccaactgtgctctgtcctac aaaggagcctggtggtacaaaaactgccatcgggccaacctaaatggaaaatatggcgag tcgagacacagtcagggtatcaactggcataactggaagggtcatgagttctctatccca ttcgtggagatgaagatgaggccatttaactaccgcagcatcagtggcaagcgaaggagg tccactcctccagaataa

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