KEGG   Salvelinus namaycush (lake trout): 120056438
Entry
120056438         CDS       T07522                                 
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03015  mRNA surveillance pathway
snh04261  Adrenergic signaling in cardiomyocytes
snh04382  Cornified envelope formation
snh04530  Tight junction
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    120056438
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    120056438
 09150 Organismal Systems
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    120056438
  09158 Development and regeneration
   04382 Cornified envelope formation
    120056438
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:snh01009]
    120056438
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:snh03019]
    120056438
   03036 Chromosome and associated proteins [BR:snh03036]
    120056438
Protein phosphatases and associated proteins [BR:snh01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     120056438
Messenger RNA biogenesis [BR:snh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     120056438
Chromosome and associated proteins [BR:snh03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     120056438
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz Beta-prop_IFT122_1st WD40_WDHD1_1st WDR55 Beta-prop_WDR3_1st Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_1st Beta-prop_HPS5 Peptidase_M27_Wo
Other DBs
NCBI-GeneID: 120056438
NCBI-ProteinID: XP_038860524
UniProt: A0A8U1C314
LinkDB
Position
12:complement(6605259..6759870)
AA seq 446 aa
MKCFSRYLPYLFRPSSTILSSSCHTEADIISTVEFNPTGELLATGDKGGRVVVFQREQGS
KNQPHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKTVKL
WKVSERDKRPEGYNLKDEEGRIRDPTTITALRVPVLQPMDLMVEATPRRVFSNAHTYHIN
SISVNSDYETYMSTDDLRINLWNLEITNRSFNIVDIKPANMEMLTEVITAAEFQPNQCNT
FVYSSSKGSIRLCDMRASALCDNHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYLM
TRDYLTVKVWDLNMESKPLETYQVHDYLRSKLCSLYENDCIFDKFECVWNGSDSVIMTGS
YNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILH
SAWHPSENIIAVAATNNLYIFQDKVN
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgaaatgcttctcccggtacctaccttacctcttcagaccctcgagcaccatcctctcc
tccagctgtcacaccgaagctgacatcatatccacggttgagttcaacccaactggagag
ctgctggcgaccggggacaagggagggagagtagtggtgttccagagagaacaggggagt
aagaaccagcctcacaggagaggggagtacaatgtttacagcaccttccagagccacgag
cctgagtttgactacctgaagagcctggagatcgaggagaagatcaacaagatacgatgg
ctgcctcaacagaacgctgcctacttcctcctctccaccaatgataaaacagtgaagctg
tggaaggtcagtgagcgggacaagagaccggagggctacaacctgaaggacgaggaaggg
aggatccgagaccccaccaccatcaccgccctgcgggtaccagtgctgcagcccatggac
ctgatggtggaagccactcccaggcgagtattctccaatgcccacacgtaccacatcaac
tccatctctgtgaacagtgactacgagacctacatgtccacagatgacctgagaattaac
ctgtggaacctggagatcaccaaccgaagtttcaacatcgtggacatcaagccggccaac
atggagatgctgacggaggtgatcacagcagcagagttccaacccaaccagtgtaacacc
ttcgtttacagcagtagcaagggctccatccgactgtgtgacatgagggcctcagcactg
tgtgacaaccactccaaattgttcgaggagccagaggaccccagtaaccgctccttcttc
tccgagatcatatcgtccatctcagacgtcaagttcagccacagcgggcgctacctgatg
acacgggactacctcacggtcaaggtgtgggacctcaacatggagagcaaacctttggag
acctaccaggttcatgactacctgaggagtaagctgtgctccctgtatgagaacgactgc
atcttcgacaagtttgaatgtgtctggaacgggtctgacagtgtgatcatgaccggctcg
tacaacaacttcttccgcatgttcgaccgcaacaccaagcgtgacgtgaccctggaggcg
tcgagagagaacagcaagccccgggccatcctgaagcccaggaaggtgtgtgtagggggc
aagagacgcaaggacgagatcagcgtggacagcctggacttcagcaagaagatcctgcac
agcgcctggcacccctctgagaacatcatcgccgtggccgccaccaacaacctctacata
ttccaagacaaggtcaactaa

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