Salvelinus namaycush (lake trout): 120056445
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Entry
120056445 CDS
T07522
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 6-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00061
Fatty acid biosynthesis
snh00071
Fatty acid degradation
snh01100
Metabolic pathways
snh01212
Fatty acid metabolism
snh03320
PPAR signaling pathway
snh04146
Peroxisome
snh04216
Ferroptosis
snh04920
Adipocytokine signaling pathway
Module
snh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120056445
00071 Fatty acid degradation
120056445
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120056445
09143 Cell growth and death
04216 Ferroptosis
120056445
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
120056445
03320 PPAR signaling pathway
120056445
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
snh01004
]
120056445
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120056445
Enzymes [BR:
snh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
120056445
Lipid biosynthesis proteins [BR:
snh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
120056445
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of breast milk
120056445
Exosomal proteins of breast cancer cells
120056445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
120056445
NCBI-ProteinID:
XP_038860533
UniProt:
A0A8U1ENV4
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All DBs
Position
Sna12:complement(8584307..8617839)
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AA seq
668 aa
AA seq
DB search
MERMQAQELQSSLQLPELDELNQFFRSLPISTLVGIGALTAVLAYWLATRPRAISPPCNL
QHQSEEVAHEDGVRRSMLGDSPNNLLTHYHEDAKTMYEVFQRGLHIAGDGPCLGSRLPDK
PYKWLSYKEWIISELACYTYSMVVVPLYDTLGPDAIRYIINTADIVTVICDKPEKAQVLL
GNVERQETPGLKRIILMDPFDPALLEEGAGCGVIVQSIQDVEDLGRENHRKPLPPTPEDL
SIVCFTSGTTGNPKGVMLTHGNVVADFSGFLKVTDKVIFPNQDDVLISFLPLAHMFERLI
QSVVYCHGGRIGFFQGDIRLLSDDMKALRPTIFPVVPRLLNRMYDKIFSQANTPLKRWLL
NFAAKRKGAEVSRGIIRMDSLWDKIFFSKIQASLGGRLRMIVTGAAPASPTVLGFLRAAL
GCQVYEAYGQTECTAGCTFTTPGDWTSGHVGAPLPCNLIKLVDVAEKNYFARKGEGEVCV
KGPNVFKGYLKDPERTAETLDTDGWLHTGDIGRWLPNGTLKIIDRKKHIFKLAQGEYISP
EKIENIYIRCEPVTQLYVHGDSLQSCLVAIVVPDPETMPAWALKKGMEGSYRDLCKNTVL
KKAIMEDLQRLGKASGLHSFEQVKNIHIHNEQFSIQNGLLTPTLKAKRPELREFFKEKIE
DLYENISM
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggagaggatgcaggcccaggagctgcagagcagtctacagctgccagagctggatgag
ttaaaccagttcttccgctccctgcccatctccacgctggtgggcatcggtgccctgacc
gccgtgctggcctactggctggccacacggccacgtgccatctctcctccctgcaatctc
caacaccagtctgaagaagtggcgcatgaagatggggttcgcaggtccatgctgggggac
agccccaataatctgctgacacactaccacgaggatgccaaaaccatgtatgaggtgttc
cagagaggcctccacatagccggtgatggaccttgcttaggctcccggctacccgacaag
ccttacaagtggctgtcctataaagagtggatcatttcggagctggcctgctacacctac
tctatggtggtggtgcctctgtatgacacactagggcctgatgccatacgctacatcatc
aacactgcggacatcgtcacagtaatctgtgacaagcctgagaaggcccaagtgcttctg
ggtaacgtggagaggcaggagacccctgggctgaagaggatcatcctgatggaccccttt
gaccctgccctgctggaggagggagcgggctgcggggtcatcgtccagtccatacaagat
gtggaggatctgggcagagagaaccacagaaagcccctgccacctacaccagaagacctg
tccatcgtgtgcttcaccagtggtaccacaggaaacccaaagggagtcatgctgacacat
gggaatgttgtggctgatttctcaggcttcctcaaagtgacagataaagtaatattccca
aaccaagacgacgttcttatctccttcctgcctctggctcacatgtttgaaagactcatc
cagtctgtggtgtattgtcatggtggccggatcggtttcttccaaggcgacatccgcctg
ttgtctgatgacatgaaggccttacggcccaccatcttccctgtggtacctcgactgctc
aaccgcatgtatgacaagatcttcagccaggccaacaccccattgaagcgttggctgctg
aactttgcagctaagagaaaaggggcagaggtcagtagggggatcatccgcatggacagc
ctgtgggataagatattcttcagtaagatacaggccagcctgggtgggaggttacgcatg
attgtaactggagctgctccggcctcccccactgtactggggtttctcagggctgcactg
ggttgtcaggtgtatgaggcatatggccagacagagtgtactgctggctgtactttcacc
actcctggagactggacctcaggtcatgtgggggcaccattgccatgtaacctcatcaag
ctggtggatgtggctgagaagaactactttgcacgcaagggagaaggagaggtgtgtgtg
aaaggacccaatgttttcaagggctacctcaaagaccctgagaggactgctgaaaccctg
gacacagacggttggctccacaccggagacatagggagatggttacctaacggtacactg
aagatcattgacaggaagaagcacatctttaagctggcccagggagagtacatctcccct
gagaagatagagaacatttacatccgctgtgagcctgtgacccagctctacgtccatggt
gacagcctacagtcctgtctggttgccatagttgttcctgacccagagacaatgcctgca
tgggccctgaagaaaggcatggaggggagctatcgggacctctgtaaaaatactgtcctg
aagaaagccatcatggaagacttgcagagactgggcaaggccagtggcctccactcgttt
gagcaggtgaaaaacatccacatccacaacgagcagttctccatacagaatggcctgttg
actcccacattaaaagcgaagagacccgagctaagggagtttttcaaggagaagatcgaa
gacctgtacgaaaacatctccatgtga
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