Salvelinus namaycush (lake trout): 120056461
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Entry
120056461 CDS
T07522
Name
(RefSeq) POU domain, class 2, transcription factor 3-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120056461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120056461
03021 Transcription machinery [BR:
snh03021
]
120056461
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120056461
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
120056461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
120056461
NCBI-ProteinID:
XP_038860558
UniProt:
A0A8U1C1R8
LinkDB
All DBs
Position
Sna12:12459597..12470603
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AA seq
402 aa
AA seq
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MSTDGVEHSEAHHEQADNEQNGIDFTRQIKTEVLNDSPHSVLSHKTCHLTQGAPISGGQL
SGLSSLHTMQQLVLMPGSHHLSPPSSFLLSQTQHTGHQGIALLQQNLLSFPTQSQSGLLQ
HQPGLALTPQAMSRSGLTSSSMESHLDMSHLQVPKHMGPPQQDEASDLEELEQFAKAFKQ
RRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAENCP
SDSMSNAVSLPPLMEGYGRKRKKRTSIETNIKLTLEKRFLDNPKPNSEEIMLISEQLSME
KEVVRVWFCNRRQKQKRIYCPVSTSPMKSHNFNSRMASTSRSYSPPASGGKLSSSSSPNS
PTRGPSPGTLRSGSAALTSQVNQSFSSPGSWYRTWNPTSYHH
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagacggggtggaacactcagaggctcaccatgaacaagcagacaatgaacaa
aatggaattgacttcaccagacaaatcaagacagaggtcctcaatgactctccccattct
gtcttatcacacaagacatgtcacctgacacaaggagccccaatatctggtggccagcta
tcagggctctcctccctacacaccatgcagcagttggtgcttatgccaggctctcaccac
ctctcacctccatcctccttcctcctctcacagacacaacacacggggcaccaaggtata
gcacttctgcagcagaacctcctcagctttcccacccagagccagtcaggcctcctccag
caccagcctgggttagcattgacacctcaggccatgagtcggtcgggcctgacgtcgtcg
tccatggaaagccacctggacatgtcccacttgcaggtccccaaacacatggggcccccc
cagcaggacgaggccagtgacctggaggagctggaacagtttgccaaggccttcaaacag
agacgcatcaaattgggctttacccagggtgatgtaggcctggctatggggaagctgtat
gggaatgacttcagccagaccaccatctcccgcttcgaggccctcaacctaagcttcaag
aacatgtgcaagctgaagcctctacttgagaagtggctgagtgacgcagaaaattgcccc
tctgactctatgagcaatgctgtctctctaccccccctgatggaaggctatggaaggaaa
agaaaaaagaggacaagcatcgaaaccaacataaagctcaccctggagaaacgcttcctt
gacaaccccaagcctaactcggaggagatcatgctgatctcagagcagctgtctatggag
aaggaggtggtgcgggtgtggttctgtaaccgcagacagaagcagaagaggatctactgc
cccgtgtccacctcaccaatgaaatcacacaacttcaactccagaatggcatccacgtcc
agatcatacagccctcctgcttcaggaggcaagttgtcatcgagttcctctcccaatagt
cctactcgtgggccttcgcctggaacactccggtctggctccgctgctctgacctctcag
gtcaaccagtccttcagctcaccagggtcgtggtatcgcacatggaaccctacgtcctat
caccactga
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