Salvelinus namaycush (lake trout): 120056473
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Entry
120056473 CDS
T07522
Name
(RefSeq) RNA-binding protein Nova-1-like isoform X1
KO
K14944
RNA-binding protein Nova
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120056473
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120056473
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
DUF1233
Motif
Other DBs
NCBI-GeneID:
120056473
NCBI-ProteinID:
XP_038860573
UniProt:
A0A8U1C1S8
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Position
12:17021431..17038545
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AA seq
519 aa
AA seq
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MMAGGAVEQNGIFLNPLHHNQHPHMESDPPDSRKRPLTPTEEDCCTKRTNTGEEGEYFLK
VLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVH
SFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQVRHGPLQPTLTRNPNRLITTTTDN
TAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRK
AVEIIVQKIQEDPQSSSCLNISYSNISGPVANSNPTGSPYANSAEVLPNAAAAAATASSL
LGQAGLAGMGGFPGTMSSFSGNDLLAITSALNTLASYGYNTNTLGLGLNPAAASGVLAAV
AASANPAAAAAANLLASYASDASGSGHPAVGLGGFSLGSLAAAAGASNGYLNASSPLMAS
SLLAAEKLGEGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTR
NRKVTITGSPAATQAAQYLISQRITYEQGVRATNPQKVG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgatggccggtggagcagttgaacaaaacgggatattcttgaatcctcttcatcacaat
caacatccccacatggagtcagatccccccgactctcgtaaacgaccactaactccgacg
gaggaggactgttgtaccaagcgcacaaacacgggagaggagggtgagtacttcctgaag
gtgctgatccccagctatgcggccggctctataattggcaagggtggccagaccatcgta
cagctgcagaaagagacgggcgccaccatcaagctgtccaaatccaaagacttctaccca
ggaaccacagagcgggtgtgtctgatacagggtacggtcgaggcactaaatggcgtccac
agcttcatcgcggagaaagtccgcgagatgccccagagcgcccagaaaacagagccagtc
agcatactgcaaccacagaccactgttaaccccgatcgcgtcaaacaggtgagacacggt
ccattacagccaaccctgacacggaacccaaaccggcttattaccacgacgaccgacaac
acagctaagttaatagtgcccaacagcacggctggtctgatcatcggtaagggcggggcc
acagtcaaggcggtgatggagcagtcgggtgcctgggtccagctgtcccagaagcccgaa
ggcatcaacctacaggagcgcgtggtcacgatcagcggggagcccgagcagaaccgcaaa
gccgtggagatcattgtccagaagatccaggaggaccctcagagcagcagctgcctcaac
atcagctactccaacatttcgggccccgtggccaactccaaccccaccggttccccctac
gccaactcggctgaggtccttcccaacgccgctgcggctgccgccactgcctccagcctt
ctaggccaggccggcctggcaggaatgggcggcttcccgggaaccatgtccagcttctct
ggcaatgacctgctggccatcacctcggccctcaacacactggccagctatggctacaac
accaacaccctgggactgggcctcaaccccgccgctgcctccggggtcctggccgccgtg
gctgctagtgctaacccagctgctgctgccgccgctaacctcctggcctcctatgccagc
gatgcctccggctccggccatcctgctgttggcctggggggcttctccctgggctcgctg
gccgccgccgcgggggcctccaacggctacctgaatgcctcgtccccactgatggcttcc
tccctgctggccgcagagaagctgggagaaggggccaaggacgtggtggagattgctgtg
cccgagaatctggtgggcgccatcctggggaaaggcgggaaaacactggttgagtaccag
gagctgacgggcgctcgcatccagatctccaaaaagggagagttcatacccggcacgcgg
aaccgtaaagttaccataacagggtcacccgcggcaacgcaagccgcccagtatctgatc
agccagaggatcacgtatgagcagggtgtgcgtgccaccaacccacagaaggtgggctaa
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