Salvelinus namaycush (lake trout): 120056481
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Entry
120056481 CDS
T07522
Name
(RefSeq) cytotoxic and regulatory T-cell molecule-like
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120056481
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120056481
04090 CD molecules [BR:
snh04090
]
120056481
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
Nectin family
120056481
CD molecules [BR:
snh04090
]
Proteins
120056481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
V-set
C2-set_2
Ig_2
C2-set_3
Lep_receptor_Ig
LapA_dom
TMEM154
Orf78
DUF7116
CrgA
DUF6476
V-set_CD47
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
120056481
NCBI-ProteinID:
XP_038860580
UniProt:
A0A8U1EQN3
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All DBs
Position
12:17838450..17851438
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AA seq
451 aa
AA seq
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MPLKLQLCFLVLFVRGSVAVQHMTVMEGETLTIKCRIRNAHRSHVEWKNPNGHVMFFNDH
KALRDKRYKIINLSESDFSVSVSDVTFKDGGLYTCLHYTKVPVVKSVTVTVLGMPKLEIT
EHNGKTTIKCSAVGNSHPPKISWLLGSGLEIDAQPQSQYLLEKNTYSSLDILHVQSHKRR
VTVKCIVRHPALHNSSLMNFVKIGQNPSEESHSTSRTSHWPSTEGPKTVSRWPGTQVSTE
KPTATALDWPNTKRSPASTPDSQLSPHSQPAHSVFEATGYTLANDSSSNLTSTTDWSSVS
QTTENTPHNGTRTNSTNARGIFDETERQRGNGSSAPLLIFLVTCLILGLLVVVVFFVIKL
RRAHILWKKENEDSDQSVESSRSKSSNEEKQSRRRGNGLFNIGFTKYVVEEPMATETTTT
TNTKTEEAPEIQIIPQTDGATLSPQIKETEL
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgccactaaagctgcagctttgcttcctagtcttgtttgtaaggggatccgttgcagtg
caacatatgaccgtgatggagggtgagactctaaccattaagtgtcgcattagaaatgcc
cacaggagccacgtggaatggaagaatcctaacgggcatgtgatgtttttcaatgaccat
aaggccctgagggataagcgctacaagataatcaacttgtccgagtccgatttttcagtc
agtgtgtctgatgtcaccttcaaagatggaggcctctacacatgtttacattacacaaaa
gtgcctgtagtgaagtcagttaccgtgacagttttgggtatgccaaaattggagataaca
gaacacaatggaaagactaccatcaaatgttctgcagtgggaaatagccatcctccaaaa
atttcatggcttttggggagtgggttagaaattgatgctcagcctcagtcccagtatctt
ttggaaaaaaacacatattcctccctggatatcttgcatgttcagtcccacaagaggaga
gtcacagtgaaatgcatcgttcgccatccagccttacacaattcttctctgatgaatttt
gtaaaaattggacagaatccctctgaggaatcacactccacttcgagaacctctcattgg
ccaagtacagaaggtccaaaaacagtctcccgttggcctggtacacaggtgtcaacagaa
aaaccaacagctacagccttagattggcccaatacaaagcgttcaccagcatcaacccct
gactcacaactcagccctcacagtcagccagcccactcagtgtttgaagctacagggtac
acacttgctaatgacagcagcagcaacttaaccagtactaccgattggtcgtcagtgtcc
cagacaacagagaacacacctcataatggcacaagaaccaactccactaatgctagagga
atcttcgatgagacggagaggcagagaggaaatggaagcagtgcgccgttgctcatcttc
ctcgtgacgtgcctcatccttggtctgctggtggtcgttgtgttctttgtaatcaagctg
aggagggctcacatactctggaagaaagaaaatgaagactctgatcaatctgtggagagc
agcagatcaaaatcaagcaatgaagagaaacaatccagaagaaggggaaatggacttttt
aacattggattcacaaagtatgtcgttgaggaaccaatggcaacagagacgacaacaaca
acaaacaccaaaacagaagaggctcctgaaattcaaatcatcccacaaacagatggagca
accctaagccctcagatcaaggagacggaactgtaa
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