Salvelinus namaycush (lake trout): 120056514
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Entry
120056514 CDS
T07522
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120056514
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120056514
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120056514
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Motif
Pfam:
Ank_2
Ion_trans
Ank
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
120056514
NCBI-ProteinID:
XP_038860620
UniProt:
A0A8U1BP65
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Position
Sna12:complement(27028624..27051784)
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AA seq
805 aa
AA seq
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MNKSKGPEYPSFSLETDDRTDDERAQSRQVKKPDRLVSALGLGSSGGPKAPMDSDYQDEL
EEAAPKIRFNLNFDKEVRCLEENKEDRDSKRFDIKRLFEAVSTGDVMKLEGLHQYLHQSM
KKLSNTEYQSYGKNVLLKALLNLRNGRNNTIEYLLDISEKMGDIKELVNAAYTDSYYKGQ
TALHIAIERRSTYFVELLIKKGANVHAKACGKFFQPHDGPSFYFGELPLSLAACTNQPEV
VDFLLENDYQKVDVRESDSLGNMVLHALVVLADNTPENTDFITSMYDHILTTAARLHPKW
RLEDIENNQGLTTIKLAAKTGKIGLFKHMMHREFQERETRNLSRKFTEWVYGPVHSSLYD
LASLDSYEKNSVLEIIVYSSDIPNRHEMLQIEPLNRLLEEKWDKFAARMFFLNFLVYLVY
LSVFTVVAYYRKKGTPPFTLEHTRQEYLRLAGQLFITVGACYFFIRGILDLKRKRPSLDS
LLIDGYSEILFFLQAIFFLASSVLYCCGREEYLGFFVLCLALSWVNLLYFSRGYRHMGIY
SVMIQKMILSDILRFLFVYVTFLFGFSAAVVTLLMEPESPANKTAQPINSTDGRGRTFFL
PTEEDSCIKPTFRNISHTIMELFKFTIGMGDLEFTEGYQYKEVFYMLLISYIVLTYILLL
NMLIALMSRTVEKMSLESTSIWKLQRAITILDLERSLPRCLRRRLRSGVDKDLGTRAGEK
DRRWCFRVEEVNWNKWNTNLGIINEDPGSGDTARLSPTHSSRTLGRERSWRGFLGNVSRR
QHTQPKQQTQVESTEMSSLSPLSHV
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtcaaagggcccagagtacccttccttctctctggagacggatgacaggacg
gatgatgagagggcacagagcagacaggtgaagaagcctgacaggctggtgtctgccctt
ggcttaggcagttcgggggggcccaaagcccccatggactcagactaccaggatgagctg
gaggaggccgctcccaagattagattcaatctcaattttgacaaagaagtgcgatgtttg
gaggagaacaaagaggacagggacagcaagaggtttgacatcaagaggctgtttgaggcc
gtgtccactggtgacgttatgaagctggaggggctgcatcagtacttgcatcagtccatg
aagaagctctccaacactgagtatcaatcgtatggtaaaaacgtcctgctgaaggctcta
ctgaatctgagaaatggcagaaataacacaattgaatatctccttgacatctcagagaag
atgggtgacatcaaagaattagtaaatgctgcatacacagacagctattacaaaggtcaa
acagcccttcatattgccattgagagaaggagcacctattttgttgagctattgatcaag
aaaggagcaaacgtccatgccaaagcctgtgggaaattcttccagccccatgatggaccc
agcttctactttggtgagctgcctctgtccctggctgcgtgcaccaaccagcctgaggtg
gtggacttcctgctggagaatgactaccagaaagtggacgtgagggagagtgattctctg
ggtaacatggtgttgcatgccctagtggtgttggctgataacacaccagagaacactgac
ttcatcacctctatgtacgaccacatcctcacaacagctgcccgcctgcaccccaaatgg
aggctggaggacatagagaacaaccagggcctgacgactataaaactggctgccaagact
ggcaagatcgggctgtttaagcacatgatgcatcgtgagttccaggagagggagaccaga
aacctgtcccgtaaattcactgagtgggtttacggacccgtccactcctccctgtatgac
ctggcctcactggactcctacgagaagaactctgtcctggagatcatcgtctacagcagt
gacattcctaatcgccatgagatgctgcagattgagcctctgaacaggctactggaggag
aagtgggacaagtttgctgctcggatgtttttcttaaacttcctggtttacctggtttac
ctctctgtcttcactgttgtcgcctactacaggaagaagggaacgccaccttttactctg
gaacataccagacaggagtacctgcgactcgccggtcagctttttataaccgtgggagcc
tgctatttcttcataagagggatattagacttgaagagaaaacgtccaagcctggacagt
ttgctgattgacggatacagtgaaatccttttttttctgcaggcgatcttcttcctggcc
tcctcagtgctgtactgctgtggtagggaggagtacctgggtttttttgtgctgtgtctg
gctctcagctgggtcaacctgctctacttctccaggggatacagacacatgggcatctac
agtgtcatgatacagaagatgatcctaagtgatatcttgcgctttctctttgtctacgtt
accttcctctttgggttttcagcagcggtggtcactttgctgatggaacctgaatcgccg
gccaataaaacagcacagccaataaacagcacagatggaagaggtcgtacctttttcctt
cccactgaggaggattcgtgtataaaacccaccttcaggaacatctctcacactatcatg
gagctgttcaagttcaccatcggcatgggagacctggagttcacagaggggtaccagtac
aaggaagtgttttacatgctgctaatctcctacatcgtgctcacctacatcctgctgctc
aacatgctcatcgccctcatgagccgcactgtggagaagatgtccctggagagcaccagc
atctggaaactacagcgggccatcaccatcctggatctggaaaggagcctgcctcgctgc
ttgagaaggaggcttcgttctggggtggacaaggacctggggaccagggctggagagaaa
gaccgccgatggtgcttcagagtggaggaagtcaactggaacaaatggaacaccaacctg
ggaataatcaatgaggatccaggaagcggagatacggccaggctgtcccctacacacagc
agcagaacgctaggcagagagaggagctggcgggggttcctgggaaatgtcagtcgaaga
caacatacacagcctaagcaacaaacacaagtagagagcacagagatgtcctctctgtcc
cctctcagccatgtctga
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