Salvelinus namaycush (lake trout): 120056533
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Entry
120056533 CDS
T07522
Symbol
taf9
Name
(RefSeq) transcription initiation factor TFIID subunit 9
KO
K14535
transcription initiation factor TFIID subunit 9
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120056533 (taf9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120056533 (taf9)
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120056533 (taf9)
Coactivators
SAGA/TFTC/STAGA complex
120056533 (taf9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID-31kDa
CENP-S
Bromo_TP
Histone
CENP-T_C
LonB_AAA-LID
TIP49_C
TAF10
Glyco_hydro_49N
Motif
Other DBs
NCBI-GeneID:
120056533
NCBI-ProteinID:
XP_038860639
UniProt:
A0A8U1C2W0
LinkDB
All DBs
Position
Sna12:32131560..32139634
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AA seq
246 aa
AA seq
DB search
MASPKTVPKDAQVMIQILKDMGITEYEPRVINQMLEFTYRYVTTIIEDAKIYATHAKKNI
VDADDIRLAIQCRMDQSFTSPPPRDFLLEVARQKNQTPLPLIKPYTGPRLPPDRYCLTAP
NYRLKSIQKKVSSSAGRITVPRLSIGAVSSRPSTPTLGTPSVQSVTTKVGTPVSLSGQRF
SVQIPSSQTTASKSSTPSTPMVQNVLINPSLIGSKKILITTNMVSQNSASESLKRKHEDD
DDYDAL
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggcttctccgaaaactgttcctaaagatgcacaggttatgatccaaatcctcaaagac
atggggataacagagtatgagcccagagttattaatcaaatgctggaatttacctacaga
tatgtgacaactattatcgaggatgccaaaatctatgcaacacatgccaagaagaacatt
gtggatgctgacgacataagactggcgatccagtgtcgaatggaccagtccttcacctcc
ccaccaccacgagatttcctgctggaagtagctaggcagaagaaccagacccctctgccc
ttgattaagccatacactgggccacgcctgccccctgaccgttactgtcttactgctcct
aactacaggcttaagtccatacagaaaaaggtgtcctcatctgcggggagaataacagtg
cctcgcctcagtataggagctgtgtccagcaggcccagcacgcctacccttggcactccc
tcagtgcagtcagtcacaaccaaagtggggacgccagtgtcactgtcggggcagcgcttc
agcgttcagatcccatcctcacagactacagcctccaagtcctccacaccatccacccca
atggttcaaaatgtcctcatcaacccctccctgatcggatccaaaaagatcctcatcacc
accaacatggtgtcacagaactcggccagcgaatcgctgaagaggaagcatgaagacgac
gatgactatgatgcattatga
DBGET
integrated database retrieval system
