Salvelinus namaycush (lake trout): 120056546
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Entry
120056546 CDS
T07522
Name
(RefSeq) rho GTPase-activating protein 35-like
KO
K05732
glucocorticoid receptor DNA-binding factor 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04510
Focal adhesion
snh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120056546
09142 Cell motility
04810 Regulation of actin cytoskeleton
120056546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120056546
Membrane trafficking [BR:
snh04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
120056546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
FF_RHG35_4th
RhoGAP-FF1
Ras
GTP_EFTU
FF
Cdh1_DBD_1
Motif
Other DBs
NCBI-GeneID:
120056546
NCBI-ProteinID:
XP_038860657
UniProt:
A0A8U1BWT7
LinkDB
All DBs
Position
Sna12:33999355..34010165
Genome browser
AA seq
1526 aa
AA seq
DB search
MIMMAKKHDVKSPTYNLIVVGLSGTEKEKGQCGVGKSCLCNRFVRPSADDFYLDHTSVLS
TSDFGGRVVNNDHFLFWGEVGRVVEEGPECRMHVVEQTEFIDDQTFQPHRSTAMQPYIKR
AASTKLASAEKLMYFCTDQLGLEQDFEQKQMPEGKIQADGFVLCMDVSRGMNRNFDDQLK
FVTNLYGHLSKTKKPIVLVLTKCDEGVERYIKDSHTFAITKKSLPVVETSARSNINVDLA
FLTLVQLIDKSRGKPKIIPYFEALKLQSQQIALAKDRYEWLVNRIVKNHNETWLNTSRRM
HTASEFNEYVFLEGTAKCKKLFQQLVYRLKQEHIERRRKIYLSTLPLALSSLVPDLDEID
QLSWSGVQKVLESKQHFAHWFVVLEDSPWEDTSHIDNMEDERIPSDLLETLPAEDIFDAH
LEHLRNECKRAEMRQEFKHKLACSPFVTPGKPWEEARSFIMNEDFYQWLEESEYLDLYNR
HQKEIIGHAKEDFQELLLEYSELFYELEVDAKPSKEKMGAIQEVLGEEQRFKALQKLPAE
RDALVLKHIHFVYHPTKETCPSSPQCGDFKIEQLLASRFPTCYPFFNVKSYFGDIKADRI
NLVILGKDGLAREFANEIRALCTNDDRYVLDGKMYELTLRPIEGNVRLSVNSFHTPTFTP
HGCLCLYNSKESLTYVVESIERLRESTIGRRDSHIAQLLTSLLLVTKRGVGTYADIGGET
ALGLITQGQQVARRLQCSFLDPASPGVGYGHNVNESQINQVLRGLLDSRRSSSFSSSSPP
LPPQPPGPRDSPHQPSPEADIRIVMCLMCGDNYDVEQLLSPFLLPQHCRPTSNSGTSVIL
EQTVGPHKQVIELSLLSYHASFSLRKSRLVHGYIAVYSARRKASLETLCAFLCEVQDIIP
VQLLAVGESQVELTESESAREQLVQGEELAQEIEGRFNSVVCGSGGVVGGLHRMEMFHPF
LMEVVEKRNIVEATHMYDNVAEACINETAYSPRCSSPSPGTMFLDSDMDDVEPSPPYYDG
TLTSHGGSFNLPDLDSSDVSVISDISSFENKLNSKATPQVRPKPSVTFDFRKVGRNPYNT
DTMGHRRSLPSAVTWVPGGDGGYDPSDYAEPMDAVSKPRPSNEEIIYSVPHDSTQGKIIT
IRNANRMHANGNGSDSEADSSSLERCRKFSAAGVKPRLYRDRSKRLGKFSSFRTSFIGSD
DEMGALPKTKEDEFGTLKGDIINEEGEDPKKRNILKSLRRTAKKTRPKPRPSIPKPLESS
YFGVPLVNVVSPDRPIPLFIDKCVRFIETTGLNTEGLYRVSGNKCEMESMQRQFDQDHGL
DLVEKDFAINTVAGALKAFFSELPEPLVPCILQVELLEAFKLNDREQRLYTMKDVLRRFP
RENYDVFRFVMSHLHKVSQLSRQNLMTSENLSICFWPTLMRPDFTTMDALTATRTYQTII
ETFIHQCAFFFYNQPLLDSPTGLAGFPASPTTTLTGGSANSCYHSSPPSTATHFSPLQQS
PPTTPQSPLQSLLTPLHHTPTEQETL
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atgataatgatggcgaaaaagcacgatgttaagtcacccacatacaaccttattgtggtg
ggtttgtcagggactgagaaagagaagggccagtgtggagtgggtaagtcctgcctgtgt
aaccgctttgtgcgccccagtgctgatgacttctatctggaccacacgtcagtgctgagc
accagtgactttgggggtagagtggttaacaatgaccatttcctgttctggggggaggtg
gggcgggtggtggaggaggggccggagtgcaggatgcatgtggtggagcagacagagttc
attgatgaccagacgttccagccacaccgcagcactgccatgcagccctatatcaagagg
gcggcctccaccaagctggcctctgcagagaagctgatgtacttctgcacggaccagctg
gggctggagcaggactttgagcagaagcagatgcctgagggcaagatacaggctgacggg
ttcgtgctctgtatggacgtcagtagggggatgaaccgcaactttgacgaccagttgaag
tttgtcacaaacctttacggtcatctgagcaaaacaaagaagcccattgtgctggtctta
accaagtgtgatgagggggttgaacgctacatcaaagattctcacacctttgccatcact
aaaaagagtcttccagtagtggagacttctgcacgctctaacatcaatgttgacctagcc
ttccttactttggtgcaactcattgataagagcaggggcaagcccaagatcattccttac
tttgaggccctcaagctccagagtcagcagatagccttggctaaagaccgatacgaatgg
ctagtcaaccgcatagtgaagaaccacaacgagacctggcttaacaccagcagacgcatg
cacactgcttcagagttcaatgaatacgtctttctggagggtacagcaaaatgcaaaaag
ctcttccagcagcttgtgtaccgtctgaaacaggagcacattgagagacgtcggaaaatc
tatctgagcactcttcctctagcacttagctccctggtgcctgacctggatgagatcgac
cagctgagctggtctggggttcagaaggtcctggagtctaagcagcactttgcccactgg
tttgtagttctggaggactctccatgggaggacacgtctcacatagacaacatggaggat
gagcgcatcccctcagacctgctggagacgttaccagccgaggacattttcgacgcccac
ctggagcacctgaggaatgagtgcaagcgggctgagatgaggcaggagttcaagcacaag
ttggcctgttctccctttgtcacgcctggcaagccctgggaagaggcccgcagctttatc
atgaatgaagacttctaccaatggttggaggaatcagagtacctggacctctacaaccgc
caccagaaagagatcatcggccacgctaaagaggacttccaggagcttctgctggagtac
tccgagcttttttatgagctggaggtggacgcaaagcccagcaaggagaagatgggggcc
atccaggaggttttaggggaggagcagcggttcaaagccctgcagaagcttccagctgag
agagatgctctggtgttgaagcatattcactttgtctaccacccaaccaaggagacctgt
cccagcagcccacagtgtggagacttcaagatagagcaactcctggcctcacgtttccca
acatgctacccattcttcaacgtgaagtcttattttggggatattaaagcggaccgaatc
aaccttgtgatattgggcaaagacggactggctagggagtttgccaatgagatcagagct
ctctgtaccaatgacgaccggtatgtgttggatgggaagatgtatgagctcaccctacga
cctatcgagggcaatgtacgactttctgttaactccttccacactcccaccttcacaccc
catgggtgcctgtgtttgtacaactcaaaagagtccctaacctatgtcgtagaaagcatt
gaaaggttgcgggagtcaacaatcggtagaagggacagccatatagctcagcttttaaca
tctctgctcttggttactaaaaggggtgtagggacctatgcagatattgggggagaaact
gctttaggtctgataacacagggacagcaggtagcaaggagactgcagtgtagcttcctc
gacccagcctcccctggtgtgggctatgggcacaatgtgaatgagagtcagatcaaccaa
gtattgagaggtcttctggactctagaaggagctcatctttcagtagcagctccccacct
ctgccccctcaacctccaggtcccagagactctcctcaccagcccagcccagaggcagac
atccgcatcgtcatgtgcttgatgtgtggagacaactatgacgtggaacagctcctctct
cccttcctactgcctcagcactgcaggccaacatccaacagtggaacctcggtgatactg
gagcagacagtgggacctcacaaacaggtgattgagctctccctcctttcctaccatgcc
tccttctccctgaggaagagcagattagtgcacggctacatcgctgtgtactcagcccgc
cgcaaggcctctctggaaaccctgtgtgccttcctatgtgaggtccaggacatcattcct
gttcagctgctggctgtgggggagagccaggtggagctcacagaaagtgagtctgccaga
gagcagctggtccagggagaggagctggcccaagagatagagggcaggttcaacagtgtg
gtgtgtgggtcaggaggggtggtgggtggcctgcacaggatggagatgtttcatcccttc
ctgatggaggtggtggagaaacgcaacatcgtggaggccactcacatgtatgataacgtg
gctgaggcctgcattaacgagactgcctactcccctcgctgtagctcacccagccccggc
accatgttcctagactctgacatggatgacgtggagccctccccaccttactacgacggc
acactcacctcccatggggggagcttcaacctgcctgacctggactccagcgatgtctct
gtcatctctgacatcagctcctttgagaacaagctcaatagcaaagccacgccccaggtg
agacccaagccctctgtgacctttgacttccggaaggtgggcagaaacccctacaacaca
gacaccatgggccaccgtcgctccctgccctccgctgtgacatgggtgccaggtggggac
ggaggttacgacccctcagactatgcagagcccatggatgctgtgtccaagccccggccc
agcaacgaggagatcatctactctgtgccccatgacagcacgcagggcaagattattacc
atccgcaatgccaatcggatgcacgccaacgggaacggctcagacagtgaggcggacagc
agctccctggagcgctgcaggaagttctcggcggcgggggtgaagccacggctctaccgt
gaccgctctaaacgcctgggtaagttcagcagcttccgcaccagcttcattggcagcgac
gacgagatgggggctctgccaaaaaccaaggaggatgagttcggaaccctgaaaggagac
atcatcaacgaggagggagaggaccccaagaagaggaacattctgaagagcctgcggcga
actgccaagaaaaccagaccaaagcctcggccctctattcccaagcccctggagagcagc
tacttcggggtgcccctggtcaacgtggtgtccccagacagacctatcccactcttcatt
gacaagtgtgtccgctttattgagaccacaggtctcaacacagaggggctctacagggtg
agcgggaacaagtgtgagatggagagtatgcagaggcagtttgaccaggaccatgggctg
gacctggtggagaaggactttgccatcaacacggtggctggggctctgaaggcctttttc
tctgagctgccagagcctctggtgccctgcatcctgcaagtggagctgctcgaggccttc
aagctcaacgacagggaacagaggctgtacaccatgaaggatgtactgaggaggttcccc
agggagaactatgacgtcttcagatttgtcatgagccacttacacaaggtgagccagctg
agcagacagaacctgatgaccagtgagaatctgtccatctgtttctggcccactctgatg
cggccagacttcaccaccatggacgccctgacggccactcggacctaccagacaatcatc
gagaccttcatccaccagtgtgctttcttcttctacaaccagcccctcctggactccccc
actggcctggctggcttccctgcctcccccaccaccaccctcaccgggggctctgccaat
tcctgctaccactcctcccctccctccaccgccacgcacttcagccctctgcagcagtcg
ccccccaccaccccccagtctcccctgcagtccctcctgacccccctccaccataccccc
actgagcaagagacactgtga
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