Salvelinus namaycush (lake trout): 120056612
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Entry
120056612 CDS
T07522
Name
(RefSeq) DNA polymerase delta subunit 3-like
KO
K03504
DNA polymerase delta subunit 3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03030
DNA replication
snh03410
Base excision repair
snh03420
Nucleotide excision repair
snh03430
Mismatch repair
snh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120056612
03410 Base excision repair
120056612
03420 Nucleotide excision repair
120056612
03430 Mismatch repair
120056612
03440 Homologous recombination
120056612
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120056612
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snh03032
]
120056612
03400 DNA repair and recombination proteins [BR:
snh03400
]
120056612
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120056612
DNA replication proteins [BR:
snh03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
120056612
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
120056612
MMR (mismatch excision repair)
DNA polymerase delta complex
120056612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
MsyB
Motif
Other DBs
NCBI-GeneID:
120056612
NCBI-ProteinID:
XP_038860739
UniProt:
A0A8U1EJH6
LinkDB
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Position
12:complement(43302736..43315421)
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AA seq
445 aa
AA seq
DB search
MDDLYLDNIDEFVNDQNKIVTYKWLSLTLGVHVNLAKQMLYHYLDQKRKEGSARLHATYL
VSGKFVENGTTSHKVSVVREDQLEDAKSKMSLTVSVHVYSVQKAVLKDSGPLYSADYDAV
KENLRNCSRYSAIRCADAVPRSSAEVQQACETTQAPPPETEQIKANHSNLASKPTPKQPK
GIMGMFATKNVSQNQDSSKEIKLEQKEDAPVVATSKTKPAAKTNPVSNFFAKQAAKKPDK
SIKEEVEIAQTSSSVDEKPSSPPPKAETPVKEELAKDAVVEKDIRSKTKRLEHSDSEEEK
NDSQRKKRRRIKKPEPDSSDDEVIPDSPPQLQEKRDPSPSPEIQVKKEPVAVSHSDELSA
CKRRKRRRVLKSRTFVDDEGCIVTEKGYESESYSETEDDFKTSKPTPKNPKPSTGKKEEK
KSKKAAAACNKSTKQASIMGFFQKK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctttacttggataatattgatgaatttgtcaacgaccagaataaaatcgtg
acctacaaatggctgagtctcacccttggggtccatgtcaacctagccaaacaaatgctc
taccattacttggatcaaaagaggaaagaaggctctgctcggctccatgctacctacctt
gtgtctggcaagtttgttgagaatggtaccacgagtcacaaggtgtcagtagtgcgagag
gatcagctggaggatgcgaagtcaaagatgagcctgacggtcagcgtacacgtgtacagt
gttcagaaggctgtgctgaaagacagtggtcctctgtacagtgctgattatgacgctgtg
aaagagaatctaagaaattgcagcaggtacagtgcaattcgttgtgctgatgcggtgcct
aggtcctcggcagaggtgcagcaggcctgtgagacgacacaggccccaccaccagagacg
gagcaaatcaaagcaaaccattctaatctggcctctaaacccacccccaagcagcccaaa
ggcattatgggaatgtttgcaaccaagaatgtctcccagaatcaagattcgagcaaagag
attaaattggagcagaaagaggatgcacctgtggttgcgacctccaaaactaaacctgct
gcgaagacaaatcctgtgagtaacttctttgcgaaacaagcagccaaaaaacctgacaaa
tccatcaaggaagaggtagaaatagcccagacatcctcctcagtggatgagaagccctca
agtccacctcctaaagcagagactcctgtcaaggaggaactagcaaaggatgctgtggtt
gagaaagatattagaagtaagaccaagcgtcttgaacattcggatagtgaagaggagaag
aacgatagtcagaggaagaagagacggaggataaagaagcccgagccagacagtagtgac
gatgaggttattccagactctcctccacagttgcaagaaaagagggacccatcaccaagt
cctgagattcaagtaaagaaagaaccagttgctgtttcacattcagatgagctttcagct
tgtaaacgaaggaagaggagacgtgtcttgaaatcgcgcacatttgtggatgacgaagga
tgcattgtgactgagaaaggctatgagagtgaatcctactcagagactgaggatgacttt
aagaccagtaaaccaactccgaagaatccaaaaccatcaactggcaaaaaagaggagaag
aaaagtaagaaagctgctgcggcctgtaataaatctactaagcaggcttctattatggga
ttcttccagaagaaatga
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