Salvelinus namaycush (lake trout): 120056618
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Entry
120056618 CDS
T07522
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-3-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120056618
04082 Neuroactive ligand signaling
120056618
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120056618
Ion channels [BR:
snh04040
]
Ligand-gated channels
GABA-A
120056618
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
120056618
NCBI-ProteinID:
XP_038860746
UniProt:
A0A8U1EUU2
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Position
Sna12:complement(43619776..43629102)
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AA seq
475 aa
AA seq
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MNLVLLAFRLMCLAWLWPVTLLNGSHQPNKRRHKDVYLGENSKNQHGGRIDFKMKRSDST
KSLLIKSEQLLRIEDHDFAMRPGFGGAAIPVGIDVQVESIDSISEVNMDFTMTLYLRHYW
QDDRLAFPSSSKKSRTFDARLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVYPDGNILY
SVRITVTALCAMDFSSFPLDTQKCSLELESYAYNENDLMLYWKNGNDSLRTDEIVLSQFF
IEEFHPSYGLAFYSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMVMLSWVSFWIDRRA
VPARVSLGITTVLTMSTIITGVSASMPQVSYVKAVDIYLWASFLFVFLSVIEYAAVNYFT
TVEEMKKLKGGKIPADFNATQTMAFDGCYHDNDIDLTPFPELPSTPNTERSRTATSRNSA
AEPPPTEGTRLRRKKSIKHNLSFIMSNSYMIDSYSRVVFPMTYLMFNIIYWSLYS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggtgctcctggccttcaggctgatgtgcctggcctggctgtggcctgtcaca
ctactcaacggcagccaccaacccaacaagaggaggcacaaggacgtgtaccttggggag
aacagcaagaaccaacatggaggacgaatagactttaagatgaaaaggtctgacagcacc
aagtccctgctaattaaatctgaacagctgctccgtatcgaggaccatgactttgcaatg
cggcctggctttggaggggcagctattcctgtgggcatagacgtgcaggtggaaagcatt
gacagtatatctgaagtcaacatggacttcaccatgactctgtacctgagacactactgg
caggacgatcggctggcctttccttccagcagcaaaaagagccggacatttgacgctcgg
ctggtgaagaagatctgggtgccggacgtgttctttgtccactccaaacgctccttcatc
catgacacgaccatggagaacatcatgttgagggtgtaccctgacggcaacattctctac
agtgtcaggatcactgtgactgctctttgcgccatggacttcagtagctttcctttggac
acacagaaatgctctctggaactggagagctatgcgtacaatgagaacgacctcatgctc
tactggaagaacgggaacgattcattaaggactgatgagatcgttctctcacagtttttt
attgaagaattccacccttcctacgggcttgccttctacagcagcacgggttggtataac
aggctctacataaacttcatcctcaggaggcacatcttcttcttcatgctgcagacctat
ttccccaccatgctgatggtgatgctctcctgggtgtccttctggattgacaggagggct
gtgcctgccagagtgtcactgggtatcacaacagttctgaccatgtccaccatcatcaca
ggcgtgtcagcctccatgcctcaggtgtcttatgtaaaagctgtggacatctacctgtgg
gccagctttctgttcgtcttcctgtccgtcattgagtacgccgctgtcaactacttcacc
acggtggaggagatgaagaagctcaaggggggaaagatccctgcagatttcaatgccact
caaactatggcttttgacggatgttaccatgacaatgacattgacctgacacccttccca
gagctccccagcacccccaacacagagcggagtcggacggccacgtcgaggaactctgct
gcagagcccccacccacagagggcaccaggctacgacgcaaaaaatccatcaaacacaac
ctcagcttcatcatgagtaacagctacatgattgactcctactccagagtcgtcttcccc
atgacttacctgatgttcaacatcatctactggagcttgtactcatga
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