Salvelinus namaycush (lake trout): 120056763
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Entry
120056763 CDS
T07522
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120056763
04082 Neuroactive ligand signaling
120056763
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120056763
Ion channels [BR:
snh04040
]
Ligand-gated channels
GABA-A
120056763
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Gene cluster
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
120056763
NCBI-ProteinID:
XP_038860899
UniProt:
A0A8U1C3K4
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Position
Sna12:complement(9122608..9149463)
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AA seq
444 aa
AA seq
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MHFVYSVSNVWGNHVKSTQTENIYLDNITRVLDRLLDGYDNRLRPGFGGPVTEVKTDIFV
TSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEILRLNNLMVSKIWTPDTFFRNGKRS
ISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLMNFPMDGHACPLKFGSYAYPMSEI
VYTWKKGPLFSVEVPEESSSLLQYDLIGQTVSSERLKSNTGEYVVMTVHFHLQRKMGFFL
IQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMD
WFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKAASIKAAQEAAEAGRTDGESSSDASS
MLKKRLNSTPHFERPAEVFPNPPVNAQAFLQQGSAVPSNNLLTGTSIIDKYSRILFPLSF
GAFNLVYWIVYLTKDTMEMTRDSV
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcactttgtctacagtgtgagcaatgtttggggaaatcatgtgaaatcaacgcaaact
gagaatatctatttggataacatcacgcgtgtattggatagattactagatggatatgac
aacagactgcgacctggatttggaggtccagttactgaggtcaaaacagacatctttgtc
acaagctttggtccagtgtcagatgttgagatggagtacactatggatgtatttttccgt
caaacgtggattgatgagaggttgaaattcgagggccccatcgagattctgcgtctcaac
aacctcatggtcagcaagatctggacaccagacacattcttccggaatggcaagaggtcc
atctctcacaacatgaccactcccaacaagctgttccgcatcatgcagaacggaactatc
ctctacaccatgagattgactataaatgcagaatgtcccatgagactgatgaacttcccc
atggacggccatgcctgtcctctcaagtttggtagctatgcctaccccatgagtgaaatt
gtgtacacatggaaaaaaggaccactgttctctgtggaagtaccagaagagtcctccagc
ttgctacagtacgatctaataggacagacagtgtccagtgagaggttaaaatccaacact
ggtgaatatgtagtcatgactgttcacttccacctacaaaggaagatgggcttcttcttg
attcagacatacatcccctgtatcatgaccgtgatcctggctcaggtctctttttggatc
aataaggaatcggttcctgcacgaactgtgttcggcattaccacagtgctaaccatgacc
acactcagcatcagcgcccgccactctttgcccaaagtctcttacgccacggccatggac
tggttcatcgctgtgtgtttcgccttcgtcttctcagccctcattgagtttgccgcagtc
aactacttctccacgctgcaggccaaccgggagctccgcaaggcggcctccattaaggca
gcccaggaggcagcagaggccgggaggaccgacggagagtcctcttcggatgccagcagt
atgctgaagaagaggttaaactccacgcctcactttgagaggccagcggaggtgttccct
aaccctccagtgaatgcccaggccttcctccagcaaggctcagccgtgccgtccaacaac
ttactgacgggcaccagcatcatagacaagtactcgcgcatcctcttccctctgtcgttc
ggggccttcaacctggtctactggatcgtctatctcactaaggacaccatggagatgaca
agggacagcgtgtga
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