Salvelinus namaycush (lake trout): 120056781
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Entry
120056781 CDS
T07522
Name
(RefSeq) kin of IRRE-like protein 3
KO
K25874
Kirrel/Neph family protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120056781
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
Kirrel/Neph family
120056781
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
Ig_4
EF-hand_14
Izumo-Ig
Ig_6
Motif
Other DBs
NCBI-GeneID:
120056781
NCBI-ProteinID:
XP_038860915
UniProt:
A0A8U1C4U9
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Position
Sna12:complement(16317215..16480473)
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AA seq
746 aa
AA seq
DB search
MSLFSVFSTGASAVFTQQPTDLVVVAGQPVTLPCSIPGYHGMVLWLRDGMALGVNRDLSG
YPRYDIVGDHSKGEYHLLIQRTEMQDDAFFECQAIQAAIRTRPARLTVLVPPEDPVIVGA
PVVSLRAGDPLNLTCHADNAKPAASIIWIRNGQVLNGAMYSKTLLRDGRRESTVSTLYLS
AYNIETGQRITCRASNKAAPNGKDAVVTIDIQHLPLVNLSVEPQPILEGNLVKFHCSAKA
NPPVIHYRWAKGGSIIREVSGDTYEVIVDHSFFTEPVSCEVTNALGSTNISRNVDVYFGP
RMAAEPQSLQVDQGSDAIFNCAWTGNPSLTIVWMKRGSGVVLSNENILTLKAVRQEDAGK
YVCRAVVPRVGAGEKEVSLTVNGPPTISSTQTQQVLYGEKGQIKCFIRSTPPPDRIAWSW
KETVLESGTSGRYTVETVSSEEGVISTLTMSNIVPADFQTIYNCTAWNSFGSDTEIIRLK
EQESLRLAVIIGVAVGAFLALIVLMGTLGAFCCARFQRNLKGVGLAKNDIRVEIVHKDHN
VARETEEHTAIKQMMIERGDFQAQESVLKQLEVLQEEEKEFQHIKDPTNGYYSVNTFKEH
HGTPTMSMAPSQTGGAEVRNPSASSSATMGKQRVPTGMSFTNIYSTLGAGPNRLYDYSQR
FVLGMGSSSIELCEREFQRGSLSDSSSFIDTQCDSSVSSYSKQDGYVQFDKDSKASAASS
SSHYSQSSSQNSDLTRPLQKRMQTHV
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcttctcagtgttctcaacaggggccagtgcggtgtttacccagcagcccaca
gacctggtggtggtggcgggtcagccagtgaccctgccctgctccatccctgggtaccac
ggcatggtgctctggctccgagatggcatggccctgggagtcaacagggacctctcaggc
tacccacgttatgacatcgtgggagaccacagcaagggtgaataccacctcttgattcag
agaactgaaatgcaggatgacgccttcttcgagtgccaggccatccaggcagctatcaga
acacgccccgcccgactaactgtgctcgttccccctgaagaccctgtgattgtgggggct
cccgtggtgagtctaagagccggcgaccccctcaacttgacatgccacgccgacaatgcc
aagcctgctgcctccatcatctggatccgcaacgggcaggtcctgaatggcgccatgtac
tctaagacactgttacgggatgggcgaagggagagcacagtcagcacactctacctctct
gcctacaacatcgagacaggccaacggatcacctgtcgggcttcaaacaaggcagcgccc
aacggtaaagatgctgtcgtcaccatcgatatccaacacctgcctcttgtcaacctgtct
gtggagccccagcccatactggagggcaacctggtgaagtttcactgctctgccaaggct
aacccacccgtcatccattacagatgggccaaagggggcagcatcatcagagaggtgtca
ggtgacacctatgaggtcattgtggaccactccttcttcaccgagcctgtctcctgtgag
gtcaccaatgccctgggcagtaccaacatcagcaggaacgtggacgtctactttgggccc
agaatggctgctgagccacagtccctacaggtggaccagggatcagatgctatcttcaac
tgtgcctggacaggaaacccctccctcaccatcgtgtggatgaaacgcggctctggagtg
gtgcttagcaatgagaacatcctgacgctaaaggcggtgaggcaggaggatgctgggaag
tacgtatgtcgggcggtggtcccccgagttggagctggagagaaggaagtgtccctcact
gtgaatggtcctcccactatctccagcacccagacccagcaagtcctctacggggagaag
gggcagatcaagtgtttcatccgcagcactcctcctcccgaccgcattgcctggtcgtgg
aaggagacagtcttggagtcggggacgtctggccgatacacggtggagacagtaagctct
gaggagggggtcatctccaccctcaccatgagtaacatcgtccctgctgactttcaaacc
atctataactgcaccgcctggaacagctttgggtccgacacagagataattcgactgaag
gaacaagagtccctccgattggctgtcatcataggagtggctgtgggagcgttcctcgcc
ctcattgtcctcatgggcacattgggtgccttctgctgtgcccgcttccagaggaatctc
aaaggagtgggtttggcaaaaaacgacatccgggtggagattgttcacaaggatcacaac
gtagcgcgggaaacagaggagcacacagcaatcaagcagatgatgattgagcgtggggac
ttccaggcacaggaatctgtgctgaagcagctggaagtcctacaagaggaagagaaggag
ttccagcacattaaggatccaacaaatggctactacagcgtcaataccttcaaggagcac
catggcaccccgactatgtcaatggcccccagccagaccggcggcgcagaagtccggaac
ccttcagcttcctcttcagccaccatgggcaagcaacgcgtgccaacaggcatgtccttc
accaacatctacagcacgctaggtgccgggcccaaccgcctgtacgactacagccagcgt
ttcgtgctaggcatgggcagtagctccatcgagctgtgcgagcgtgagttccagaggggc
tcgctcagtgactccagctccttcatcgacacgcagtgcgacagcagcgtgagcagctac
agcaaacaggacggctacgtgcagtttgacaaggacagcaaggcctcggccgcctcctcc
tcctcccactactcgcagtcgtcctcgcagaactcagacctgacgcggccgctgcagaaa
cgcatgcagacccatgtgtaa
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