Salvelinus namaycush (lake trout): 120056802
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Entry
120056802 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43-like
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120056802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120056802
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120056802
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120056802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
FANCL_C
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
120056802
NCBI-ProteinID:
XP_038860931
UniProt:
A0A8U1BNZ9
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All DBs
Position
Sna12:complement(879437..1102630)
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AA seq
869 aa
AA seq
DB search
MIVLQRRLAGLWPWLLMAALQVVFGQTGLELAAAVETERSALRAVIKVTLLRDEPTGKPI
TLEGLFVGGSAGSAEGKLMQSHPLSLCNTSEDERQESDFISIVKLESPERKVPQCLPLLN
KARLALERGAQAVIFDVTDDVNAKFQLHESDSLLRPVVLMQAEDAETLMELINRNEEARV
RIDIKREDPKWPHYDVVVLLTIVLAILAIVSIFAFRYRCKSSRTWDSVHQQTMRAISRLE
TRTYSSQGCGGSQRHRGGWGSNSSSNSSPVCAICLDEFLEGQDLRIISCAHEFHKECVDP
WLLQHRTCPLCMHNIMGSELSGQPRRTRLQQTPEHSQGFLHPHAHSFPQHPIPFSMRPHY
PRGPSGPYPSLGHYSGSPPLDPQTHRFLPCRPLGPGCGYLHPAEGPGRPHRAGGSCKTAG
HPMETHYGPGPRRSCHAYRSGCPSQRNASSSRLHHAPSSAPRASAGGAHSRGNEGGSGGS
YRTERSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFV
YYGPGPGPTGRRDSMEAGVQRPRSLDSVVNRDRGRGGGGGGRRGGCSEEQQQAVFSHVHY
HRHRHHHYREEGEREHAQDQGPGRGSDEELGATAAAFGPESGSPPALDKDSPVCPLKDSP
CHCPKADHTDSRGAHGHGTEGQGHELSHPSGPPPVLVTPAPLPPPTTCCHQDHSHGGHPH
RRAGRLGDCVLDGPSVRFQQNLDLQDDCSIYIHYDQGYCCPPPDLPPALLSMPVPLILDS
GGMRPLGGLEEWPCCGGPHHVVWQKRVQQAHSEPQLLGPGLGVPTDRTPPPSSRRHHCPH
SPVDDRNTDFCLYCQTLHNNQGSEEESGV
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgatcgttctccagcggcgactggccgggctctggccgtggctgctcatggcggccctg
caggtggtgtttggccagacgggcctggagctggcggcggccgtcgagacggagcgctcg
gccctcagggctgtcatcaaggtgacactgctgagagacgagccaacggggaagcccatc
actctggaagggctgtttgtcggagggagcgccggctctgcagaggggaagctcatgcag
tcccaccctctgtccctgtgcaacaccagtgaagatgagcgccaggagtcagacttcatc
agcatcgtcaagctggagagcccggagcgcaaggtgccccagtgtctgcccctgctcaac
aaggctcgcctggcgttggagagaggggctcaggctgtcatctttgatgtcaccgatgat
gtcaacgctaagttccagctgcatgagtcagattccctgctgcgtccggtggtgctgatg
caggctgaggatgctgagacgctgatggaactgatcaacaggaacgaggaggccagagtc
cgcatcgacatcaagagggaggaccccaaatggccccactatgatgttgttgtcctgctc
actatagtccttgctattctggccatcgtttcgatctttgctttccggtaccgatgcaag
tccagcagaacctgggactcagtccaccagcagacgatgcgagccatcagtcgtctggag
acgcggacgtacagctctcagggctgcgggggctcacagcgccaccgtgggggctggggg
tctaatagcagctctaactccagtcccgtctgtgccatctgtctggatgagttcctggag
ggacaggacctgaggatcatctcgtgtgctcatgagttccataaggagtgtgtggacccc
tggctgctgcagcaccgcacctgtcccctctgcatgcacaacatcatgggttcagagctg
tctggacagccacggaggaccagactacagcagacccccgagcacagccagggtttcctg
cacccccatgcccactccttcccccagcaccccatccccttctccatgaggcctcactac
ccccgcggcccctctggtccatacccctccctgggccactatagcggctccccgcctctg
gacccccagacccaccgcttcctcccttgccgccccctgggccctggctgcggatacctc
caccctgcagagggccccggaaggccccacagagccgggggcagctgcaagacagcaggc
caccctatggagacccactacggccccgggccccgccgctcctgccacgcctaccgctcc
ggctgcccttcccagcgcaacgcctccagttccaggctccaccacgccccctcctctgct
ccccgcgcctccgcagggggagcccacagccgggggaacgaggggggctctggggggagc
taccggacagaacgcagtggctacctggctgatgggccggccagtgactccagctctggc
ccctgtcacggctcctccagtgactcggtactcaactgtactgacgtgtccctgcagggt
gtgtacggtagctggtccacgttccgcagctctctgagcagtgactatgatccgtttgtg
tactacgggccggggccgggaccgacaggccgcagggacagcatggaggcaggggtccag
agacccaggtccttggattcagtggtgaacagagacagaggacgaggaggaggaggagga
ggaagaagaggagggtgctctgaggaacagcagcaggctgtgtttagccacgtccactac
caccgccaccgtcaccaccactaccgagaggaaggggagagggagcacgcccaggaccag
gggccaggcagggggtcggacgaggagctgggggctactgctgctgcttttggccctgag
tcaggatcacccccggctctggacaaagattccccagtgtgccctctgaaagacagccct
tgtcactgccctaaggcagaccacacagacagtagaggggcccatggccacgggacagag
ggtcagggccatgagctcagccacccctcaggtccccctccagtcctggtaaccccagcc
cccttaccacccccaaccacctgctgccaccaggaccacagccacgggggccacccccac
cggagggcaggccggctgggcgactgtgtgctcgatggcccctcggtgcgtttccaacag
aacctggacctgcaggacgactgtagcatctacatccactatgaccagggctactgctgc
cccccgcccgacctgccccccgctctgctctccatgcctgtgcccctcatcctggactct
ggaggaatgaggcccctggggggcctagaggagtggccctgctgtggagggccccaccat
gtggtgtggcagaagcgggtgcagcaggcccactctgagccccagctgctggggcccggg
ctgggggtccctacggacagaaccccgcccccatccagcaggcgccaccactgtccccac
agcccagtggacgaccgcaacacagacttttgtttatactgccaaacattacacaataat
cagggatccgaggaggagtccggcgtgtga
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