Salvelinus namaycush (lake trout): 120056818
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Entry
120056818 CDS
T07522
Symbol
smyd4
Name
(RefSeq) SET and MYND domain-containing protein 4 isoform X1
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120056818 (smyd4)
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
120056818 (smyd4)
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GFIT
Motif
Pfam:
zf-MYND
SET
TPR_12
TPR_2
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
120056818
NCBI-ProteinID:
XP_038860967
UniProt:
A0A8U1ETA4
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Position
Sna12:complement(2405806..2420075)
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AA seq
825 aa
AA seq
DB search
MDLPCVEWQKHVEQKWSRLTLDEKKSFSSLLDIDEVFDFGLSQIIQEDVDFLSGISKDYP
IQKDLERAARCRKEGNSSFKARDYTAAVLHYSQGVCHASLSSEQLSLCYANRSAALFHLQ
HYRECLEDIDRALNHGYPSHLKHKLQDRQAQCLNHFPNGTEGLNTTKQGAGHQAEGVCNR
TNSTKPNPKSPNSQQQNGRSPVSCLSPGLSVCFSPEKGRHLVATKGIAAGDVILEDRAYS
CVLIPGMGGERREETEEAGRVFGTEVRCCHQCLGETVSPVPCEGCSYARYCSEGCRRGAW
ERHHRWECPIGAELCTAGVMSQLALRVALKAGVKEVLKAREPIRDADNNSKLIGEKISSK
NSSSKPITEKIRPKKKNSGSSDVTSTEPEINDPSAYYHGDSYLSVYHLLPHLNGHAPSLR
FLCSVTIATLYLRLRQAGPPPVSWERRGASESRKCSNQSQAPEEGEGWAPELSLLGSVVL
RHMLQLRCNAQAVSLLRDTGDFTAVQSTQEVRIATAIFPTLSILNHSCCPNTSLNFRTSH
LVSPQPDLVSTDELVSTGPEACSAPVSVSAGLAVSIRASRDICPGQEVLHCYGPHSSRMV
LCERRRLLQEQYHFLCICQACSLEQGKGPEGGGPEGGGPDTHLQCGKCEGPVKQCSVDGA
GGFVCVRSSCAHRVSRSELDLRLQEVRVQLEQAVDLLETDRPDQSVRLLQRAVSQAGVFL
KETHPLQGQLADAMARAYSTMGEWRGAASQLERSVVAIRSQYGEDSIELGHQLFKLAQLH
FNGGFPGPALSVISRARRLLSLHCGPHCPEVQELQAMEDCLQGVL
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggacctgccgtgtgtcgagtggcaaaagcatgttgaacagaagtggagccgactcact
cttgatgagaagaaaagcttctcgtccctgttggacatagatgaggtctttgattttggc
ctgtctcaaataatccaagaggacgtagactttctgtcgggcatttctaaggactatcct
attcagaaggaccttgagcgagctgccagatgccggaaggagggcaactccagctttaaa
gccagggactacactgctgctgtcctgcactactcacagggtgtgtgtcatgcgtctctg
agctcagagcagctctctctgtgctatgccaaccgttctgcagcactattccacctccaa
cactacagggagtgcctcgaggacatcgacagagccctgaaccatggctacccaagtcac
ctgaagcacaaactacaggacagacaggcacaatgcctcaaccacttccccaacgggaca
gaggggctaaacaccaccaagcagggggcaggacaccaggcagagggtgtgtgtaacagg
accaactcaacaaagcccaacccaaagtccccaaactcccaacagcagaatgggaggtct
cctgtgtcgtgtctctcccctggattgtccgtgtgcttcagccctgaaaaagggcgacac
ctggtggccaccaagggaatcgcagccggcgacgtgatcttggaggacagggcttacagc
tgtgtgcttatacccgggatggggggagagagaagagaggagacggaggaagcaggaaga
gtgtttgggaccgaggtgaggtgctgtcatcagtgtttgggggagacggtgagccctgtg
ccatgtgaggggtgcagctacgctcgctactgctcagaggggtgtcggcggggcgcgtgg
gagcggcatcatcgctgggagtgtccaatcggagccgagctgtgtactgcgggagtgatg
tcacagctggcgctgagggtggcgttaaaggcgggggtgaaggaggtactgaaggcacgg
gaaccaatcagagacgcggataataattctaaactaatcggcgagaagattagctccaag
aattccagttctaagccaatcacagaaaagatccgcccaaagaagaagaattctgggtcg
agtgacgtcacctcaactgagccggagatcaacgacccctctgcttattaccatggtgat
tcctacctgagcgtctaccacctgctgcctcacctgaatggccacgcccccagcctgcgc
ttcttgtgctctgtcaccatagcaacgctctacctgcggctgcgccaggcgggacctcca
cctgtgtcctgggagaggagaggagcctcagaaagcaggaagtgcagtaaccaatcgcag
gcccccgaggagggagagggctgggctccggagctaagcctgctgggaagtgtagtgctg
aggcacatgttgcagctgagatgtaatgcccaggcagtgagcctgctcagagacacaggt
gattttactgcagtgcagtccacccaggaagtgcgcattgccacggcaatattccccaca
ctgagtatcctaaaccactcctgctgccccaacacaagcctcaacttcaggacctctcac
ctggtctcacctcaaccagacctagtctctactgatgaactggtttccactggtcctgag
gcctgttctgctcctgtctccgtatccgctggactagctgtctctatcagagcgtccaga
gacatctgtcctggacaggaagtcctccactgttacggtcctcacagcagcaggatggtg
ttgtgtgagcgtcggcgcctcctacaggagcagtaccacttcctgtgtatctgtcaggcc
tgcagtctggagcaggggaaggggccagagggcggagggccagagggcggagggccagac
acacatctgcagtgtgggaagtgcgagggacctgtaaagcagtgcagcgtggacggtgca
ggggggttcgtgtgtgtgcggtcgtcttgcgctcatcgtgtgtcacgctctgaactggac
ctcagactgcaggaggtcagggttcagctggagcaggcagtggacctcctggagacagac
agaccagaccagtctgtccggttgttacagagagccgtgtctcaggctggtgtcttcctg
aaagagactcatcctctacagggacaactggctgatgccatggccagagcatattccact
atgggtgagtggcgaggggcagcgtctcagttggagcgtagtgttgtagccattcgttcc
cagtatggagaggacagtattgaactgggacatcagctttttaaactggcacagctgcac
ttcaatgggggtttcccaggtccagcgctctctgtgatctccagggccagaagactcctg
tccctccactgtggaccccactgtcctgaggtacaggaactgcaggccatggaggactgt
ctacagggggtgttgtaa
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