Salvelinus namaycush (lake trout): 120056831
Help
Entry
120056831 CDS
T07522
Name
(RefSeq) sarcoplasmic/endoplasmic reticulum calcium ATPase 1-like
KO
K05853
P-type Ca2+ transporter type 2A [EC:
7.2.2.10
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04020
Calcium signaling pathway
snh04148
Efferocytosis
snh04260
Cardiac muscle contraction
snh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120056831
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120056831
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
120056831
04261 Adrenergic signaling in cardiomyocytes
120056831
Enzymes [BR:
snh01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.10 P-type Ca2+ transporter
120056831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1-E2_ATPase
Cation_ATPase_C
Cation_ATPase
Cation_ATPase_N
Hydrolase
Hydrolase_3
HAD
DUF3738
Motif
Other DBs
NCBI-GeneID:
120056831
NCBI-ProteinID:
XP_038860989
UniProt:
A0A8U1C3P5
LinkDB
All DBs
Position
Sna12:4228663..4342058
Genome browser
AA seq
1005 aa
AA seq
DB search
MDSAHTKSASEVLENFSVNENTGLTLEQVKSNFEKYGPNELPAEEGKSLWELVVEQFEDL
LVRILLLAACVSFVLALFEEGEETITAFVEPIVILLILIANAVIGVWQERNAENAIEALK
EYEPEIAKVYRMNRKAVQRVKAREIVPGDVVEIAVGDKVPADIRITSIKSTTLRVDQSIL
TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGRAIGIVVSTGVSTEIGKIRNQMA
ATEQEKTPLQQKLDEFGEQLSKVISLICVAVWIINIGHFSDPVHGGSWMRGAIYYFKIAV
ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ
MSVCKMFVVDKVEDSSCAVHEFSITGSTYAPEGQVLKGDKVVQCGDYDGLLELATVCSMC
NDSSLDYNEVKGVYEKVGEATETALTTLVEKMNVFKTDMSGLSKVERAGACNSVIRQLMK
KEFTLEFSRDRKSMSVYCTPINKPGSGCKMFIKGAPESVMERCQYLRVGTGKVALTMPLR
EQLTSLIRDWGTGRDTLRCLGMATRDSPPKQQDMDLENSTKFAEYETGLTFVGCVGMLDP
PRKEVTGSIQLCAEAGIRVIMITGDNKGTAVAICRRIGIFGEDEDVVGKAYTGREFDDLP
IDSQRDAVKRARCFARVEPAHKSKIVGYLQSFDEITAMTGDGVNDAPALKKAEIGIAMGS
GTAVAKSASEMVLSDDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAILG
LPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRNPKEPLISGWLFFRYLAIGG
YVGLGTVGAATWWYLFDDEGPHVSFYQLRHFMQCSEDNPMFQGIDCEVFESRFPTTMALS
VLVTIEMFNSLNSLSENQSMIRMPPWVNFWLLGAIVLSMSLHFLILYVEPLPLIFQVTPL
TWCQWIVVLKISFPVILLDEALKYISRNHLDDNDDKKYRNRQLKY
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggatagcgcgcacacgaaatccgcatctgaagttttagagaacttcagtgtgaacgaa
aacactggactcacacttgaacaagtcaaatctaattttgaaaaatatggaccgaacgag
cttccggctgaagaaggcaagtcactatgggagctggtggtggagcagtttgaagacctc
ctggtcagaatcctgttgttagctgcctgcgtctcctttgtgctagctctgtttgaggag
ggagaggagaccatcacagccttcgtggaacctatcgtcatcctgcttatcctcatcgct
aacgctgtgatcggagtctggcaggagaggaacgcggagaacgccatcgaggcgctgaag
gagtacgagccagagatagccaaggtgtaccgcatgaaccgcaaggctgtccagagggtc
aaagcccgggaaatagtgcctggggacgttgtagagattgccgttggtgacaaggtccct
gctgacatcaggatcacctccattaagtctaccaccctgagagtggaccagtctattctt
acaggcgagtctgtgtcagtgatcaaacacaccgaccccgtccctgaccccagagctgtc
aatcaagacaagaagaacatgctgttttctggcaccaacatcgctgcagggcgagccatc
ggcatcgtggtctccaccggtgtatccacggagatcggtaagatcaggaaccagatggca
gccacggagcaggagaagacccccctgcagcagaaactggacgagttcggggagcagctc
tccaaggtcatctccctgatctgcgtggccgtctggatcattaacatcggccattttagt
gacccggtccacggggggtcctggatgcggggggccatctactacttcaagatcgctgtg
gccctggctgtggctgccatccctgagggtctacctgctgtgatcaccacttgcctggcg
ctggggacccgccgcatggccaagaagaacgccattgtccgcagcctgccctcggtggag
accctaggctgtacctccgtcatctgctccgacaagaccggcaccctcaccactaaccag
atgtctgtctgcaagatgtttgtggtggacaaggtggaggattccagctgtgctgtccat
gagttctctataactggctcaacctacgcccctgaaggacaagtgttgaaaggggacaag
gtggtgcagtgtggagattatgatggtcttctggagctggccactgtctgttccatgtgc
aacgactcttcactggactacaatgaggtcaaaggagtgtatgagaaggtgggtgaggcg
acggagacggccctcactaccctggtggagaagatgaacgtgttcaagactgacatgtca
ggcctcagcaaggtggagcgtgccggagcctgcaactcagtgatcagacagctgatgaag
aaagagtttactctggagttctcgcgtgatcgcaagtccatgtctgtgtactgtaccccc
atcaacaaaccaggctccgggtgcaagatgttcatcaagggtgccccagagagtgtgatg
gagcgatgccagtacctgcgtgttggcacagggaaggtggcactgaccatgcccctgaga
gagcagctgacctccctgatcagggactggggcacgggcagggacacgctgagatgcctg
ggcatggccacacgggactcgccacctaaacaacaggacatggatctggagaactccacc
aagtttgctgagtatgagacgggcctaacgtttgttggctgcgtgggtatgctggaccca
cccaggaaggaggtgactggttccatccagctgtgcgccgaggcgggcatccgtgtcatc
atgatcaccggggacaacaagggcacggccgtggccatctgccgacgcatcggtatcttc
ggcgaggatgaggatgtagtgggcaaggcctacacgggccgggagtttgatgacctgccc
atcgactcccagagagatgctgtgaagcgggcacggtgctttgcccgcgtggagcctgca
cacaagtctaagattgtgggctacctgcagtcgtttgatgagatcactgccatgactggt
gatggggtgaacgacgcgccagccctgaagaaggcagagattggcattgccatgggctcg
ggcacagctgtggcgaagtcagcatctgagatggttctgtctgacgataacttctctacc
atcgtggcggctgtggaggagggcagggccatctacaacaacatgaaacagttcatacga
tacctcatctcctccaacgtgggagaggtcgtctgcatcttcttgactgccatcttgggt
cttcctgaggctctgatcccggtccagttgctgtgggtcaacctggtgacagatggtctc
cctgcgactgccctgggcttcaaccccccagacctggacatcatggacaagccgcctcgc
aaccccaaggagcctctcatctctgggtggctgttcttcagatacctggccatcggaggg
tatgttggtctgggcacggtgggtgctgccacctggtggtacttgtttgatgatgaaggc
cctcacgtgtccttctaccagctgagacactttatgcagtgctcggaggacaaccccatg
ttccagggcatcgactgtgaggtgtttgagtctcgtttccccaccaccatggccctctcc
gtgctggtcaccatagagatgttcaactccctcaacagtctgtcagagaaccagtccatg
atcaggatgcctccgtgggtcaacttctggctgctgggagcaatcgtcctctccatgtcc
ctccacttcctcatcctctatgttgagccgttgcctctgatcttccaggtgacccctctg
acctggtgccagtggatcgtggttctaaagatatcattccctgtcatcctattggacgag
gccctcaagtacatctcccgcaaccacttagacgacaacgacgacaagaagtacaggaac
aggcagctaaaatattaa
DBGET
integrated database retrieval system
