Salvelinus namaycush (lake trout): 120056875
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Entry
120056875 CDS
T07522
Name
(RefSeq) PDZ and LIM domain protein 4-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120056875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120056875
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120056875
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
BNR_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120056875
NCBI-ProteinID:
XP_038861061
UniProt:
A0A8U1EUW3
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Position
Sna12:9956898..9995281
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AA seq
372 aa
AA seq
DB search
MPQTVTLKGPSPWGFRLVGGRDFSTPLTISRVTPDSKAAQGDLCPGDTILAINGDSTETM
THMEAQNRIKACMGELTLAVSRSEDKVWSPTVIEDGKTSPFMATLESESPQNFRPISTGP
ITGGYISGYSSGHNGSGYRKPSYISEPPHLNNGTSKQLNNMQYNNPAGLYAHNNGSNGDR
DRVLPKQMGSLSLSSPHSPEPPTHSPLGRNGNGPCFEVTTESDVYKMLQDPEEPVSAPKQ
SGSFKYLQGILEAEDGGVSPTDRSGVRSLRSPVQSPVPKLGSPIPGPMPGLQKLPQCTRC
GNGIVGTIVKARDKLYHIECFMCDDCGLNLKQRGYFFIEENLYCETHAMARVQPPEGYDV
VAVYPNSKVELV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgccccagaccgtgacactgaagggaccctcaccttggggttttcgactggtcggtgga
agggactttagtacaccgttaactatttcgagggtaacaccggacagtaaggcggcacag
ggggacctgtgtcctggggacaccatcctggccatcaatggcgacagcacagagaccatg
acacacatggaggcccagaacaggatcaaggcctgcatgggggagctcacactggccgtc
agcaggtctgaagacaaagtctggtctccaactgttattgaagatggcaagaccagtcca
ttcatggctacgttggagtctgagtccccacagaatttccgaccaatcagcactggacca
atcacaggtggatacatcagtggctacagcagcggtcacaacggcagtggatacagaaaa
ccctcctacatctccgagccgccgcacctcaacaacggcacctccaagcagctcaacaac
atgcagtacaacaacccagccggcctgtacgcacacaacaatggcagcaatggagacaga
gacagggtcttgccaaaacaaatgggcagcttgagcctgagctccccacacagccctgag
cctccgacgcattctcctctgggacgtaatgggaacggtccttgttttgaagtcaccaca
gagtcagacgtgtacaagatgctgcaggacccagaggagccagtctctgcacccaaacag
tccggctccttcaaatacctacagggcatactggaggcagaggatggaggtgtgtccccc
actgacaggtctggagtgagaagcctaaggtccccagttcaatccccagtccctaaattg
ggcagccccattcctggccccatgcctggcctacagaaactcccccagtgcacgcgctgt
ggcaacggcatagtgggcaccatcgtgaaggccagagacaaactgtaccacatagagtgc
ttcatgtgtgacgactgcggcctgaacctcaagcagaggggctacttcttcattgaggag
aacctgtactgtgagacccacgccatggcccgtgtccagcctcctgagggatatgacgtg
gttgcagtctaccccaactccaaggttgaactggtctga
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