Salvelinus namaycush (lake trout): 120056924
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Entry
120056924 CDS
T07522
Symbol
dtx2
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX2 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120056924 (dtx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120056924 (dtx2)
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120056924 (dtx2)
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120056924 (dtx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-UDP
zf-rbx1
WWE_5
Motif
Other DBs
NCBI-GeneID:
120056924
NCBI-ProteinID:
XP_038861139
UniProt:
A0A8U1C3W9
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Position
Sna12:complement(14171986..14191118)
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AA seq
625 aa
AA seq
DB search
MATASSSCVGINGSRNGPSISTPTLVASGQSQPMVVVWEWQDDLGFWRPYSGQVSGYIEQ
YFSSPRGHRGGGPGSTSISLGQSDPSLSPYLIDIPSLNQFRQDTGKTRSVRRQLFAQSSG
LGSGVYWEWANDEGGWTPYETRTSILLEHSYLARQATADMASHGYNYIVDLTALAQVNKA
TGFRRQVRRQGNFPYPLASGASVIHSGPACSCHQCLSHSCTGPMPSRSRHSFSSGQLSRP
SFQGPSRAAGAHPTSVYSPYPRRPLSVGGMAWGGPWPLTPSASQFPGPPLSYPTSANGLS
VPAIPLQRNGSTSVSSALAGMASILMSAVGLGVCFTSAPLPHPSSAPPPPSSTSRPAGSK
THSSSSVRRAKRQHRTAPAQKPEDVIHRYMEEVASAQDEDCIICMDRLSCPSDYAVASEG
AQSIPPGAVGKFTKCGHTLHMLCMLAMYNNGTKDGSLQCPSCKTIYGEKTGTQPKGKMEI
YSIAQSLPGHPDCGTIQIIYSIPPGIQGPEHPNPGQPYTCRGFPRFCFLPDNDKGRKVLE
LLKVAWTRRLIFTVGTSSTTGEPDTVVWNEIHHKTEMMSNVSGHGYPDPNYLENVLSELS
SQGVTDHCLVKQEGPSQGGASNSGL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcctctagctcctgtgtggggataaatgggtctagaaatggaccctctatc
tctacaccgacattggtagcatctggacaatctcagcccatggtcgttgtatgggaatgg
caggatgatcttggcttctggcgaccatatagcggccaggtgagcggctatatcgaacaa
tacttctcctctccgcggggacacagaggtgggggtcctggctccaccagcatcagccta
ggacaatcagatcccagcttgtcgccttatctcatagacataccaagcttgaaccagttc
cgccaagatacagggaaaacgcggtctgtacgccgtcaattgtttgcccagtcctcaggc
ttgggtagcggagtatattgggagtgggcaaatgacgaaggaggatggactccatacgag
actcgcacttctattctactagaacacagctacctggcacggcaggccacggcggatatg
gcctcacacggctataactacatagtggacctcacagcgctggcccaggtcaacaaggcc
acgggcttcaggcggcaggtccgacggcagggtaactttccctacccactggcgtctggc
gcctccgtcatccactcgggccctgcctgctcctgccaccagtgtctgagccacagctgc
actggccccatgcccagccgctcacgccactccttctcctctgggcagctgagccggccc
agcttccagggccccagcagggcggctggagctcaccccacctcagtgtactcgccctac
cccaggaggcctctttctgtggggggcatggcgtggggtggtccctggcccctgacaccc
tccgctagtcagttccctggacctccactgtcttaccctaccagtgctaatggcttaagt
gtccccgccatccctctgcaacggaatggatccaccagtgtgagctcagcccttgcaggc
atggcctccattttgatgtcagcagtgggactcggtgtgtgcttcacgagtgcccccctc
ccgcacccctcctccgctcctcctccccccagcagcaccagcaggcccgcaggctccaaa
actcacagcagcagctcggttaggagggcaaagaggcagcacaggacagccccagcacag
aaaccagaggatgtcattcaccgctacatggaggaagtggcctctgctcaagacgaggac
tgcatcatctgtatggaccggctgtcgtgtccgtcggattacgccgtggcgtccgaggga
gcacaatccatcccacccggcgctgtgggaaagttcaccaagtgtggacacaccttgcac
atgctctgcatgcttgccatgtacaacaatggaaccaaggatggcagcctccagtgcccg
tcatgcaagacaatctatggggagaagacggggacccagcccaagggcaagatggagatc
tatagtatcgcacagtccctccccggccacccagactgtggaactatccagataatttac
agcatcccccctgggatacagggtccagagcaccctaacccggggcagccatacacctgt
agaggcttccctcgcttctgcttcctcccagacaacgacaagggcagaaaggtgcttgag
ctgctgaaggtagcgtggacgcggcgcctcatcttcacagtgggcacgtctagcaccacg
ggcgagcccgacacggtggtgtggaatgagatccaccacaagactgagatgatgtccaac
gtgtcaggccacggctacccggaccccaactatctggaaaatgtgctgtccgagctgtcc
tctcagggggtgacggaccactgcctggtcaaacaggagggccccagccagggaggagcg
tcaaactctggactgtga
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